BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0050.1
(166 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731 FOR... 91 2e-22
>AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731
FORWARD LENGTH=244 | 201606
Length = 244
Score = 90.5 bits (223), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 92/147 (62%), Gaps = 16/147 (10%)
Query: 14 NANNIPILNGNNFKDWKESVLIVLGCMDLDLALRVEQPAPLTDDSSPDERRHYERWDRSN 73
N ++IP+L+G+NF +WKE +L+VL MDLDL+L E+P SSP E +H WDRSN
Sbjct: 34 NVDSIPMLSGSNFSEWKEHLLLVLALMDLDLSLMTERP------SSPKELKH---WDRSN 84
Query: 74 RMSLMIIKRGIPEAFRGAISAEVTKAIDFLAEIEKRYEKNDKAETGTLLANLTSM----- 128
R+S+MI+K IP+ FRG + +VT A DFLA +E + KN++AE + A +SM
Sbjct: 85 RVSIMIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIEN 144
Query: 129 -RIFRVFLESCTGDALRYRL-VDKIFS 153
+ + + T A R RL ++ IFS
Sbjct: 145 ENVRELIMRMKTLGAKRKRLGINNIFS 171