BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0100.1
(189 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 59 3e-10
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 54 1e-08
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 58.5 bits (140), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 84 DRGEFWDFMRNFNIQ---ISGPWCAMGDFNAITTEVEKWG--GTGLNRRSAKQFRSMISD 138
+R WD + + + PW +GDFN I + E + + ++ + + ++ + D
Sbjct: 100 ERRSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRD 159
Query: 139 CDLIDIGCSGPAYTWVNGREINTHIRERLDRVLANTQWRLRFP 181
DL+D+ C G YTW N ++ N +R +LDR + N W FP
Sbjct: 160 SDLVDLPCRGVLYTWSNHQQDNPILR-KLDRAIVNGCWLATFP 201
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 106 MGDFNAITTEVEKWG--GTGLNRRSAKQFRSMISDCDLIDIGCSGPAYTWVNGREINTHI 163
+GDF+ I + + T + R ++F++ + D DL+DI G YTW N ++ N I
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 164 RERLDRVLANTQWRLRFPDSI 184
R +LDR +AN W FP +I
Sbjct: 284 R-KLDRAIANGDWFSSFPSAI 303