BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0110.1
(279 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32400.3 | tobamovirus multiplication 2A | Chr1:11689393-1169... 358 e-125
AT1G32400.2 | tobamovirus multiplication 2A | Chr1:11689393-1169... 358 e-125
AT1G32400.1 | tobamovirus multiplication 2A | Chr1:11689393-1169... 358 e-125
AT2G20740.1 | Tetraspanin family protein | Chr2:8935788-8937292 ... 134 3e-38
AT2G20230.1 | Tetraspanin family protein | Chr2:8725762-8727388 ... 117 4e-31
>AT1G32400.3 | tobamovirus multiplication 2A |
Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606
Length = 280
Score = 358 bits (918), Expect = e-125, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 223/282 (79%), Gaps = 5/282 (1%)
Query: 1 MACRGCLECLLKIFNFLLTLVGLGMIGYGIYLFVEWKRITDKP---DLPPMNTDHEFIQL 57
MACRGCLECLLK+ NFLL + GLGMIGYGIYLFVE+KR+TD DL N D ++
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDL--TNGDQSYVSF 58
Query: 58 GRPMLLVVSLSTNILDKLPKAWFIYLFIAIGAILLLISCFGCIGAVTRNGCCLSCYSLLV 117
GRP+L+ VSLS+NI D LPKAWFIYLFI IG L +ISC GC+G +R+ CCLSCYSLL+
Sbjct: 59 GRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLL 118
Query: 118 VLLILAELGSAAFIFFDKSWKDVIPKDKTGDFDMIYNFLDDNWKIAKWVALGVVIFQVLL 177
+LLIL ELG AAFIFFD SW+D +P D+TG+FD IYNFL +NWKI +WVALG V+F+ LL
Sbjct: 119 ILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALL 178
Query: 178 FLLAIVVRAANRPADYDSDEEYIAPKSGVRQPLINRQVVPATGVPVTGTLDQRPSRNDAW 237
FLLA++VRAAN PA+YDSD+EY+AP+ +RQP INRQ P TGVPV TLDQRPSR+D W
Sbjct: 179 FLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPW 238
Query: 238 STRMREKYGLDTSEFTYNPSASNGYPQPSAPAAEESSRCAIM 279
S RMREKYGLDTSEFTYNPS S+ + Q A EE RC IM
Sbjct: 239 SARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280
>AT1G32400.2 | tobamovirus multiplication 2A |
Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606
Length = 280
Score = 358 bits (918), Expect = e-125, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 223/282 (79%), Gaps = 5/282 (1%)
Query: 1 MACRGCLECLLKIFNFLLTLVGLGMIGYGIYLFVEWKRITDKP---DLPPMNTDHEFIQL 57
MACRGCLECLLK+ NFLL + GLGMIGYGIYLFVE+KR+TD DL N D ++
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDL--TNGDQSYVSF 58
Query: 58 GRPMLLVVSLSTNILDKLPKAWFIYLFIAIGAILLLISCFGCIGAVTRNGCCLSCYSLLV 117
GRP+L+ VSLS+NI D LPKAWFIYLFI IG L +ISC GC+G +R+ CCLSCYSLL+
Sbjct: 59 GRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLL 118
Query: 118 VLLILAELGSAAFIFFDKSWKDVIPKDKTGDFDMIYNFLDDNWKIAKWVALGVVIFQVLL 177
+LLIL ELG AAFIFFD SW+D +P D+TG+FD IYNFL +NWKI +WVALG V+F+ LL
Sbjct: 119 ILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALL 178
Query: 178 FLLAIVVRAANRPADYDSDEEYIAPKSGVRQPLINRQVVPATGVPVTGTLDQRPSRNDAW 237
FLLA++VRAAN PA+YDSD+EY+AP+ +RQP INRQ P TGVPV TLDQRPSR+D W
Sbjct: 179 FLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPW 238
Query: 238 STRMREKYGLDTSEFTYNPSASNGYPQPSAPAAEESSRCAIM 279
S RMREKYGLDTSEFTYNPS S+ + Q A EE RC IM
Sbjct: 239 SARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280
>AT1G32400.1 | tobamovirus multiplication 2A |
Chr1:11689393-11690873 REVERSE LENGTH=280 | 201606
Length = 280
Score = 358 bits (918), Expect = e-125, Method: Compositional matrix adjust.
Identities = 190/282 (67%), Positives = 223/282 (79%), Gaps = 5/282 (1%)
Query: 1 MACRGCLECLLKIFNFLLTLVGLGMIGYGIYLFVEWKRITDKP---DLPPMNTDHEFIQL 57
MACRGCLECLLK+ NFLL + GLGMIGYGIYLFVE+KR+TD DL N D ++
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDL--TNGDQSYVSF 58
Query: 58 GRPMLLVVSLSTNILDKLPKAWFIYLFIAIGAILLLISCFGCIGAVTRNGCCLSCYSLLV 117
GRP+L+ VSLS+NI D LPKAWFIYLFI IG L +ISC GC+G +R+ CCLSCYSLL+
Sbjct: 59 GRPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLL 118
Query: 118 VLLILAELGSAAFIFFDKSWKDVIPKDKTGDFDMIYNFLDDNWKIAKWVALGVVIFQVLL 177
+LLIL ELG AAFIFFD SW+D +P D+TG+FD IYNFL +NWKI +WVALG V+F+ LL
Sbjct: 119 ILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALL 178
Query: 178 FLLAIVVRAANRPADYDSDEEYIAPKSGVRQPLINRQVVPATGVPVTGTLDQRPSRNDAW 237
FLLA++VRAAN PA+YDSD+EY+AP+ +RQP INRQ P TGVPV TLDQRPSR+D W
Sbjct: 179 FLLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPW 238
Query: 238 STRMREKYGLDTSEFTYNPSASNGYPQPSAPAAEESSRCAIM 279
S RMREKYGLDTSEFTYNPS S+ + Q A EE RC IM
Sbjct: 239 SARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280
>AT2G20740.1 | Tetraspanin family protein | Chr2:8935788-8937292
FORWARD LENGTH=221 | 201606
Length = 221
Score = 134 bits (338), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 36/243 (14%)
Query: 4 RGCLECLLKIFNFLLTLVGLGMIGYGIYLFVEWKRITDKPDLPPMNTDHEFIQLGRPMLL 63
R CL+ +LK+ N L+ +VG+ MI Y ++L +W+ +LP ++DH
Sbjct: 6 RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQE--QMGNLPFADSDH----------- 52
Query: 64 VVSLSTNILDKLPKAWFIYLFIAIGAILLLISCFGCIGAVTRNGCCLSCYSLLVVLLILA 123
P WFIY F+ +GAIL +++C G I A T NGCCL Y +VLL +
Sbjct: 53 ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 100
Query: 124 ELGSAAFIFFDKSWKDVIPKDKTGDFDMIYNFLDDNWKIAKWVALGVVIFQVLLFLLAIV 183
E G A IF ++ WK P+D +G F F++ N+KI KW+ L +V Q L L+A++
Sbjct: 101 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 160
Query: 184 VRA--ANRPADYDSDEEYIAPKSGVRQPLINRQVVP-ATGVPVTGTLDQRPSRNDAWSTR 240
++A + YDSD+EY + Q RQ P G P+ G ++ AW+ R
Sbjct: 161 LKALGPHPHRHYDSDDEYNVSTVALLQD--ARQPPPYVVGEPMYG------AKPGAWTVR 212
Query: 241 MRE 243
+ +
Sbjct: 213 LMK 215
>AT2G20230.1 | Tetraspanin family protein | Chr2:8725762-8727388
FORWARD LENGTH=270 | 201606
Length = 270
Score = 117 bits (293), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 135/270 (50%), Gaps = 34/270 (12%)
Query: 3 CRGCLECLLKIFNFLLTLVGLGMIGYGIYLFVEWKRI--TDKPDLPPMNTDHEFIQ---- 56
C LKI NF+ +G+ +I Y I++ E+ R D P ++ E
Sbjct: 6 CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65
Query: 57 -LGRPMLLVVS--LSTNILDK--------LPKAWFIYLFIAIGAILLLISCFGCIGAVTR 105
L P+ V S L +N D LP WFIY F+A+G ++ +++ G I A
Sbjct: 66 PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125
Query: 106 NGCCLSCYSLLVVLLILAELGSAAFIFFDKSWKDVIPKDKTGDFDMIYNFLDDNWKIAKW 165
NGCCL YS+L LLIL E A+I D+ W+ +P D TG+ + F+++N I KW
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185
Query: 166 VALGVVIFQVLLFLLAIVVRA--ANRPADYDSDEEYIAPKSGVRQPLINRQVVPATGVPV 223
V + VV Q+L LLA+V+RA + + D +E+ P+S PL+ Q
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDPLLGPQG-------- 237
Query: 224 TGTLDQRP---SRNDAWSTRMREKYGLDTS 250
+Q P S+ + WS+R+REKYGL+ S
Sbjct: 238 ----NQAPAGSSKIENWSSRIREKYGLNQS 263