BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0200.1
(343 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 220 3e-64
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 220 3e-64
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 91 1e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 52 1e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 220 bits (560), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 169/286 (59%), Gaps = 9/286 (3%)
Query: 47 ILLIEDNEPNTYEEAVSSPDSEKWLGAMKSEMDSMSENQVWNLVDLPDGVEPIGCKWIFK 106
+ + + EP+TY EA + W GAM E+ +M W + LP +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 107 MKTDKDGNVSVFKSRLVAKGYRQVQGIDYEETFSPVAMLKSIRVILEIAAHYDYEIWQMD 166
+K + DG + +K+RLVAKGY Q +GID+ ETFSPV L S+++IL I+A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 167 VKTAFLNGKPEEDVYMTQPEGFE----DSKNAGKVCKLQRSIYGLKQASRSWNLHFDDKI 222
+ AFLNG +E++YM P G+ DS VC L++SIYGLKQASR W L F +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 223 KEFDFLKNEEESCVYKKVSGSNLVFLVLYVDDILIVGNNIPMLNSVKKWLRKCFSMKDLG 282
F F+++ + + K++ + + +++YVDDI+I NN ++ +K L+ CF ++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 283 DAEYILVIKIYRDRSRKMIGLSHETYIDKILWRFKMEDSKRGFLPM 328
+Y L ++I RS I + Y +L + K +PM
Sbjct: 315 PLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 220 bits (560), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 169/286 (59%), Gaps = 9/286 (3%)
Query: 47 ILLIEDNEPNTYEEAVSSPDSEKWLGAMKSEMDSMSENQVWNLVDLPDGVEPIGCKWIFK 106
+ + + EP+TY EA + W GAM E+ +M W + LP +PIGCKW++K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 107 MKTDKDGNVSVFKSRLVAKGYRQVQGIDYEETFSPVAMLKSIRVILEIAAHYDYEIWQMD 166
+K + DG + +K+RLVAKGY Q +GID+ ETFSPV L S+++IL I+A Y++ + Q+D
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 167 VKTAFLNGKPEEDVYMTQPEGFE----DSKNAGKVCKLQRSIYGLKQASRSWNLHFDDKI 222
+ AFLNG +E++YM P G+ DS VC L++SIYGLKQASR W L F +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 223 KEFDFLKNEEESCVYKKVSGSNLVFLVLYVDDILIVGNNIPMLNSVKKWLRKCFSMKDLG 282
F F+++ + + K++ + + +++YVDDI+I NN ++ +K L+ CF ++DLG
Sbjct: 255 IGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLG 314
Query: 283 DAEYILVIKIYRDRSRKMIGLSHETYIDKILWRFKMEDSKRGFLPM 328
+Y L ++I RS I + Y +L + K +PM
Sbjct: 315 PLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 90.9 bits (224), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 54 EPNTYEEAVSSPDSEKWLGAMKSEMDSMSENQVWNLVDLPDGVEPIGCKWIFKMKTDKDG 113
EP + A+ P W AM+ E+D++S N+ W LV P +GCKW+FK K DG
Sbjct: 27 EPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 114 NVSVFKSRLVAKGYRQVQGIDYEETFSPVAMLKSIRVILEIAAHYD 159
+ K+RLVAKG+ Q +GI + ET+SPV +IR IL +A +
Sbjct: 84 TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 246 VFLVLYVDDILIVGNNIPMLNSVKKWLRKCFSMKDLGDAEYILVIKIYRDRSRKMIGLSH 305
++L+LYVDDIL+ G++ +LN + L FSMKDLG Y L I+I S + LS
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 306 ETYIDKILWRFKMEDSKRGFLPM 328
Y ++IL M D K P+
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPL 81