BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0240.1
(250 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 74 1e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 74 1e-14
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 53 4e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 73.9 bits (180), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 59 LDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDSK-SISGYIYMMVRG 117
L H + V ++ Y++ T L + +++ +SD+ F C D++ S +GY +
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 118 VISWKNVKQTLVASSTMEVEFIACFEASNHAIWLQNFVSKLEIVDNIERPMKIYCDNKAA 177
+ISWK+ KQ +V+ S+ E E+ A A++ +WL F +L++ + +P ++CDN AA
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAA 528
Query: 178 ELYSNNNRSSSKSKYIGIKYFTVKD 202
+ N ++K+I +V++
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 73.9 bits (180), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 59 LDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDSK-SISGYIYMMVRG 117
L H + V ++ Y++ T L + +++ +SD+ F C D++ S +GY +
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 118 VISWKNVKQTLVASSTMEVEFIACFEASNHAIWLQNFVSKLEIVDNIERPMKIYCDNKAA 177
+ISWK+ KQ +V+ S+ E E+ A A++ +WL F +L++ + +P ++CDN AA
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAA 528
Query: 178 ELYSNNNRSSSKSKYIGIKYFTVKD 202
+ N ++K+I +V++
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 59 LDHWKVVKWVMRYLQRTKDYKLTFRRNNHLKIVGYSDSDFAGCIDS-KSISGYIYMMVRG 117
L + ++K V+RY++ T + L +N+ L + + DSD+AGC + +S +G+ +
Sbjct: 133 LADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCN 192
Query: 118 VISWKNVKQTLVASSTMEVEFIACFEASNHAIW 150
+ISW +Q V+ S+ E E+ A + W
Sbjct: 193 IISWSAKRQPTVSRSSTETEYRALALTAAELTW 225