BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0250.1
(142 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47830.1 | SNARE-like superfamily protein | Chr1:17613346-176... 271 2e-95
AT2G17380.1 | associated protein 19 | Chr2:7553122-7554887 FORWA... 168 2e-54
AT4G35410.2 | Clathrin adaptor complex small chain family protei... 168 2e-54
AT2G19790.1 | SNARE-like superfamily protein | Chr2:8527302-8528... 125 8e-38
AT4G35410.1 | Clathrin adaptor complex small chain family protei... 114 9e-34
>AT1G47830.1 | SNARE-like superfamily protein |
Chr1:17613346-17614784 REVERSE LENGTH=142 | 201606
Length = 142
Score = 271 bits (694), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 134/140 (95%), Positives = 137/140 (97%)
Query: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTNKVIYR 60
MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRD KFTNFVEFRT+KVIYR
Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60
Query: 61 RYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
RYAGLFFS+CVDITDNELAYLE IHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA
Sbjct: 61 RYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
Query: 121 GELQETSKKAIIERMGELEK 140
GELQETSK+AIIERM ELEK
Sbjct: 121 GELQETSKRAIIERMSELEK 140
>AT2G17380.1 | associated protein 19 | Chr2:7553122-7554887 FORWARD
LENGTH=161 | 201606
Length = 161
Score = 168 bits (426), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 99/131 (75%)
Query: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTNKVIYR 60
MI F+LL +RQGK RL K+Y P + E+ KV E+ +++NR PK NF+E+R KV+Y+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60
Query: 61 RYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
RYA L+F MC+D DNEL LE IH +VEILD +F +VCELDL+FNFHK Y ILDE ++A
Sbjct: 61 RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GELQETSKKAI 131
GELQE+SKK +
Sbjct: 121 GELQESSKKTV 131
>AT4G35410.2 | Clathrin adaptor complex small chain family protein |
Chr4:16832572-16833796 FORWARD LENGTH=162 | 201606
Length = 162
Score = 168 bits (426), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 99/131 (75%)
Query: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTNKVIYR 60
MI F+LL +RQGK RL K+Y P + E+ KV E+ +++NR PK NFVE+R KV+Y+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 61 RYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
RYA L+F MC+D DNEL LE IH +VEILD +F +VCELDL+FNFHK Y ILDE ++A
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GELQETSKKAI 131
GELQE+SKK +
Sbjct: 121 GELQESSKKTV 131
>AT2G19790.1 | SNARE-like superfamily protein | Chr2:8527302-8528395
FORWARD LENGTH=143 | 201606
Length = 143
Score = 125 bits (315), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 94/139 (67%)
Query: 2 IRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTNKVIYRR 61
IRFIL+ N+QG+TRLA+YY L E+ +E E+ R + R+ + +FVE R K++YRR
Sbjct: 3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62
Query: 62 YAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAG 121
YA LFF + VD +NELA LE IHL VE +D F NVCELD++F+ K + +L+E ++ G
Sbjct: 63 YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122
Query: 122 ELQETSKKAIIERMGELEK 140
+ ETSK I+ + ++K
Sbjct: 123 CIVETSKANILSPIQLMDK 141
>AT4G35410.1 | Clathrin adaptor complex small chain family protein
| Chr4:16832572-16833314 FORWARD LENGTH=106 | 201606
Length = 106
Score = 114 bits (286), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%)
Query: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDPKFTNFVEFRTNKVIYR 60
MI F+LL +RQGK RL K+Y P + E+ KV E+ +++NR PK NFVE+R KV+Y+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 61 RYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNV 98
RYA L+F MC+D DNEL LE IH +VEILD +F +V
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSV 98