BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0310.1
(350 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 90 2e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 90 2e-19
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 72 3e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 230 IGIEVSRSSQGIFLSQREYTLDIIADSDLIGSKPSPFPMEQKLNLHNSTGDPIPDPSINR 289
+G+E++RS+ GI + QR+Y LD++ ++ L+G KPS PM+ + +G D R
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 290 RLIGRLLYLTVTRPDITFSVNYLSQFYSHQLPRV 323
RLIGRL+YL +TR DI+F+VN LSQF + PR+
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQF--SEAPRL 411
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 230 IGIEVSRSSQGIFLSQREYTLDIIADSDLIGSKPSPFPMEQKLNLHNSTGDPIPDPSINR 289
+G+E++RS+ GI + QR+Y LD++ ++ L+G KPS PM+ + +G D R
Sbjct: 320 LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379
Query: 290 RLIGRLLYLTVTRPDITFSVNYLSQFYSHQLPRV 323
RLIGRL+YL +TR DI+F+VN LSQF + PR+
Sbjct: 380 RLIGRLMYLQITRLDISFAVNKLSQF--SEAPRL 411
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 72.0 bits (175), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 197 DVVPPGESSPFANT-IDQLASPADAAVPSSQHPSIGIEVSRSSQGIFLSQREYTLDIIAD 255
D++ G S+ N I QL+S H +GI++ G+FLSQ +Y I+ +
Sbjct: 9 DILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNN 68
Query: 256 SDLIGSKPSPFPMEQKLNLHNSTGDPIPDPSINRRLIGRLLYLTVTRPDITFSVNYLSQ 314
+ ++ KP P+ KLN ST PDPS R ++G L YLT+TRPDI+++VN + Q
Sbjct: 69 AGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQ 126