BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0360.1
(190 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38180.1 | FAR1-related sequence 5 | Chr4:17906702-17909404 R... 62 2e-11
AT3G22170.2 | far-red elongated hypocotyls 3 | Chr3:7822359-7825... 62 4e-11
AT3G22170.1 | far-red elongated hypocotyls 3 | Chr3:7822359-7825... 62 4e-11
AT1G52520.1 | FAR1-related sequence 6 | Chr1:19565933-19568248 F... 59 4e-10
AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943 REV... 50 3e-07
>AT4G38180.1 | FAR1-related sequence 5 | Chr4:17906702-17909404
REVERSE LENGTH=788 | 201606
Length = 788
Score = 62.4 bits (150), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 12 HYVYHFSKNEDTDEVTNLFWAHPDCILLLQSFHTVSLLDCTYKTNRFNKPLLEIVGVTST 71
++ Y +ED V N+FWA P I+ F D TY++NR+ P GV
Sbjct: 266 NFFYSVQGSEDQ-SVGNVFWADPKAIMDFTHFGDTVTFDTTYRSNRYRLPFAPFTGVNHH 324
Query: 72 LKSFTAAFTFMDGETTNQYTWALNRLRTLFPPNSMPIVFITDRELALINAISEVFPNAQR 131
+ F+ ET + W N + P+ TD + + AI VFP A+
Sbjct: 325 GQPILFGCAFIINETEASFVWLFNTWLAAMSAHP-PVSITTDHDAVIRAAIMHVFPGARH 383
Query: 132 LLCTFHI-DKC 141
C +HI KC
Sbjct: 384 RFCKWHILKKC 394
>AT3G22170.2 | far-red elongated hypocotyls 3 | Chr3:7822359-7825414
REVERSE LENGTH=839 | 201606
Length = 839
Score = 61.6 bits (148), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 22 DTDEVTNLFWAHPDCILLLQSFHTVSLLDCTYKTNRFNKPLLEIVGVTSTLKSFTAAFTF 81
D V N+FW SF V LD TY N++ PL VGV +
Sbjct: 260 DDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCAL 319
Query: 82 MDGETTNQYTWALNR-LRTLFPPNSMPIVFITDRELALINAISEVFPNAQRLLCTFHIDK 140
+ E+ Y+W + LR + P V IT+ ++ + + + E+FPN + L +H
Sbjct: 320 ISDESAATYSWLMETWLRAI--GGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWH--- 374
Query: 141 CVVIKVKGHFKQ--EQFNVFMTMFRAIMYTETESGYNEAVETFVKFWSKH 188
V++KV + Q +Q + FM F +Y +SG + E F + W K+
Sbjct: 375 -VLMKVSENLGQVVKQHDNFMPKFEKCIY---KSGKD---EDFARKWYKN 417
>AT3G22170.1 | far-red elongated hypocotyls 3 | Chr3:7822359-7825414
REVERSE LENGTH=839 | 201606
Length = 839
Score = 61.6 bits (148), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 22 DTDEVTNLFWAHPDCILLLQSFHTVSLLDCTYKTNRFNKPLLEIVGVTSTLKSFTAAFTF 81
D V N+FW SF V LD TY N++ PL VGV +
Sbjct: 260 DDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCAL 319
Query: 82 MDGETTNQYTWALNR-LRTLFPPNSMPIVFITDRELALINAISEVFPNAQRLLCTFHIDK 140
+ E+ Y+W + LR + P V IT+ ++ + + + E+FPN + L +H
Sbjct: 320 ISDESAATYSWLMETWLRAI--GGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWH--- 374
Query: 141 CVVIKVKGHFKQ--EQFNVFMTMFRAIMYTETESGYNEAVETFVKFWSKH 188
V++KV + Q +Q + FM F +Y +SG + E F + W K+
Sbjct: 375 -VLMKVSENLGQVVKQHDNFMPKFEKCIY---KSGKD---EDFARKWYKN 417
>AT1G52520.1 | FAR1-related sequence 6 | Chr1:19565933-19568248
FORWARD LENGTH=703 | 201606
Length = 703
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 22 DTDEVTNLFWAHPDCILLLQSFHTVSLLDCTYKTNRFNKPLLEIVGVTSTLKSFTAAFTF 81
D ++ N+FWA + F V +D +Y + +F PL+ GV K+ + F
Sbjct: 273 DEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYISGKFEIPLVTFTGVNHHGKTTLLSCGF 332
Query: 82 MDGETTNQYTWALNRLRTLFPPNSMPIVFITDRELALINAISEVFPNAQRLLCTFHIDKC 141
+ GET Y W L ++ + P +TDR L AIS+VFP + + HI +
Sbjct: 333 LAGETMESYHWLLKVWLSVMKRS--PQTIVTDRCKPLEAAISQVFPRSHQRFSLTHIMRK 390
Query: 142 VVIKVKG 148
+ K+ G
Sbjct: 391 IPEKLGG 397
>AT3G05850.1 | MuDR family transposase | Chr3:1743537-1745943
REVERSE LENGTH=777 | 201606
Length = 777
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 40 LQSFHTVSLLDCTYKTNRFNKPLLEIVGVTSTLKSFTAAFTFMDGETTNQYTWALNRLRT 99
L++ + LD +++ LL V + F AF +D ET + + W L +LR+
Sbjct: 391 LEACRPLVFLDSMQLKSKYQGTLLAATSVDGDDEVFPLAFAVVDAETDDNWEWFLLQLRS 450
Query: 100 LFPPNSMP--IVFITDRELALINAISEVFPNAQRLLCTFHIDKCVVIKVKGHFKQEQFNV 157
L S P I F+ DR+ L +I +VF + C ++ ++ +KG F E +
Sbjct: 451 LL---STPCYITFVADRQKNLQESIPKVFEKSFHAYCLRYLTDELIKDLKGPFSHEIKRL 507
Query: 158 FMTMFRAIMYTETESGYNEAVETF 181
+ F + Y + VE
Sbjct: 508 IVDDFYSAAYAPRADSFERHVENI 531