BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0400.1
(186 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 8e-48
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 8e-48
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 89 2e-22
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (422), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 121/187 (64%), Gaps = 4/187 (2%)
Query: 1 MKVEYQALIQNKTWSLIPKLPSMNVLGSKWVFKVKYRSDGSLERYKARLVAQGYNQQENV 60
M E A+ TW + P+ +G KWV+K+KY SDG++ERYKARLVA+GY QQE +
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYQETFIFVVKIQTVRIVLTLAVSNAWRIHQLDVSNAFLHRDLHKNVYMKQPQGFV---- 116
D+ ETF V K+ +V+++L ++ + +HQLD+SNAFL+ DL + +YMK P G+
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 117 DAKCPDFVCHLHKSLYGVKQAPRVWLTRNANYMIDWAFLKSSYDSSMFVYTSHDQNLIFL 176
D+ P+ VC+L KS+YG+KQA R W + + +I + F++S D + F+ + L L
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 177 LYVDDII 183
+YVDDII
Sbjct: 282 VYVDDII 288
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (422), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 121/187 (64%), Gaps = 4/187 (2%)
Query: 1 MKVEYQALIQNKTWSLIPKLPSMNVLGSKWVFKVKYRSDGSLERYKARLVAQGYNQQENV 60
M E A+ TW + P+ +G KWV+K+KY SDG++ERYKARLVA+GY QQE +
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161
Query: 61 DYQETFIFVVKIQTVRIVLTLAVSNAWRIHQLDVSNAFLHRDLHKNVYMKQPQGFV---- 116
D+ ETF V K+ +V+++L ++ + +HQLD+SNAFL+ DL + +YMK P G+
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221
Query: 117 DAKCPDFVCHLHKSLYGVKQAPRVWLTRNANYMIDWAFLKSSYDSSMFVYTSHDQNLIFL 176
D+ P+ VC+L KS+YG+KQA R W + + +I + F++S D + F+ + L L
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281
Query: 177 LYVDDII 183
+YVDDII
Sbjct: 282 VYVDDII 288
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 89.0 bits (219), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 1 MKVEYQALIQNKTWSLIPKLPSMNVLGSKWVFKVKYRSDGSLERYKARLVAQGYNQQENV 60
M+ E AL +NKTW L+P + N+LG KWVFK K SDG+L+R KARLVA+G++Q+E +
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103
Query: 61 DYQETFIFVVKIQTVRIVLTLA 82
+ ET+ VV+ T+R +L +A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125