BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0470.1
(181 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 96 6e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 96 6e-23
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 73 2e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 95.5 bits (236), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 15/116 (12%)
Query: 69 LVEDNEPNTYTEAMTSPDTEAMTSPDSEKWLGAMKSEMESMSENQVWDLVDLLDGVKPIG 128
+ + EP+TY EA E + W GAM E+ +M W++ L KPIG
Sbjct: 80 IAKAKEPSTYNEA-----KEFLV------WCGAMDDEIGAMETTHTWEICTLPPNKKPIG 128
Query: 129 CKWIFKMKTDKDGNVSVFKARLVAKGYRQVQGID----YAPVAMLKSIRIILAIAA 180
CKW++K+K + DG + +KARLVAKGY Q +GID ++PV L S+++ILAI+A
Sbjct: 129 CKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISA 184
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 95.5 bits (236), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 15/116 (12%)
Query: 69 LVEDNEPNTYTEAMTSPDTEAMTSPDSEKWLGAMKSEMESMSENQVWDLVDLLDGVKPIG 128
+ + EP+TY EA E + W GAM E+ +M W++ L KPIG
Sbjct: 80 IAKAKEPSTYNEA-----KEFLV------WCGAMDDEIGAMETTHTWEICTLPPNKKPIG 128
Query: 129 CKWIFKMKTDKDGNVSVFKARLVAKGYRQVQGID----YAPVAMLKSIRIILAIAA 180
CKW++K+K + DG + +KARLVAKGY Q +GID ++PV L S+++ILAI+A
Sbjct: 129 CKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISA 184
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 73.2 bits (178), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 98 WLGAMKSEMESMSENQVWDLVDLLDGVKPIGCKWIFKMKTDKDGNVSVFKARLVAKGYRQ 157
W AM+ E++++S N+ W LV +GCKW+FK K DG + KARLVAKG+ Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 158 VQGI----DYAPVAMLKSIRIILAIA 179
+GI Y+PV +IR IL +A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125