BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0540.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 121 1e-35
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 9e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 93 9e-23
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 121 bits (303), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 86/136 (63%), Gaps = 11/136 (8%)
Query: 1 MVTRSKAGI--FQPKVFQATKHQVSQALLTSSIPDTPTCFTQANKVPHQKDAMQVEFDAL 58
M+TRSKAGI PK + T +T++I P A K P AMQ E DAL
Sbjct: 1 MLTRSKAGINKLNPK-YSLT--------ITTTIKKEPKSVIFALKDPGWCQAMQEELDAL 51
Query: 59 QKAGTWTLVPSNSSQNLVGCKWVFKIKQKSDGSIKRYKARLVAKGFHQKQGIGFSETFSP 118
+ TW LVP +QN++GCKWVFK K SDG++ R KARLVAKGFHQ++GI F ET+SP
Sbjct: 52 SRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSP 111
Query: 119 LAKPTTIRVVLSLAVQ 134
+ + TIR +L++A Q
Sbjct: 112 VVRTATIRTILNVAQQ 127
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 93.2 bits (230), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 67/98 (68%)
Query: 35 PTCFTQANKVPHQKDAMQVEFDALQKAGTWTLVPSNSSQNLVGCKWVFKIKQKSDGSIKR 94
P+ + +A + AM E A++ TW + ++ +GCKWV+KIK SDG+I+R
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 95 YKARLVAKGFHQKQGIGFSETFSPLAKPTTIRVVLSLA 132
YKARLVAKG+ Q++GI F ETFSP+ K T+++++L+++
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 93.2 bits (230), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 67/98 (68%)
Query: 35 PTCFTQANKVPHQKDAMQVEFDALQKAGTWTLVPSNSSQNLVGCKWVFKIKQKSDGSIKR 94
P+ + +A + AM E A++ TW + ++ +GCKWV+KIK SDG+I+R
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 95 YKARLVAKGFHQKQGIGFSETFSPLAKPTTIRVVLSLA 132
YKARLVAKG+ Q++GI F ETFSP+ K T+++++L+++
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183