BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0660.1
(279 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G25400.2 | transmembrane protein | Chr1:8911463-8912329 REVER... 64 9e-12
AT1G25400.1 | transmembrane protein | Chr1:8911463-8912329 REVER... 64 9e-12
>AT1G25400.2 | transmembrane protein | Chr1:8911463-8912329 REVERSE
LENGTH=288 | 201606
Length = 288
Score = 64.3 bits (155), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 54/282 (19%)
Query: 8 ITRINGFQAEINRLQQNPSFISRILA--GIHEIYQIFSLWTLGALIL-AFLATFT----K 60
I RI F IN + +PS++SR LA G+ +++Q +S W GAL+L AF A+FT +
Sbjct: 6 INRIGDFDMGINSIN-DPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASFTSLTTR 64
Query: 61 FKLVIRRSRKVKTVLSHPSL--HTLPTQTGNVDDEEYTDGDGDGDDDDSSNCSSEFESEH 118
K ++ R R V L +L + + + + + D+ + + + + +
Sbjct: 65 IKTLVFRLRNVNVSLPSQTLLCNYDSDSDWSFSSDSSDEEKDEDDNKEDDSVNGDSRVQR 124
Query: 119 EDEQNRDEDFRVAGSRNSYEYQGYNLNHLTWSDFPTGRRVVKSWSGEFGLGLKLGLEKST 178
+ D+D ++GS P RR SG FG L LG +
Sbjct: 125 FGYYHDDDDKGISGS------------------VPWLRRC----SGSFGDLLDLG----S 158
Query: 179 ESLVSMWDFSD--------KSFFTEIKTEMLLP-AVIIPTGIENSKNVALRIWDTRVSRH 229
+V +WD D SFF++ + LL AV++ + S + + WD RV
Sbjct: 159 SGVVKLWDNLDFNGEGSPVASFFSKCGSYSLLSSAVLLAAEKKGSDGLEVSAWDARVGFG 218
Query: 230 IPEILAEWRPRWKSLPGNEDSGLANTLFSVDIRNVKKSRVDD 271
+P +LAEW+ PG L + VD+ +V K V D
Sbjct: 219 VPALLAEWKQ-----PGR----LLGKIIRVDVGDVDKIYVGD 251
>AT1G25400.1 | transmembrane protein | Chr1:8911463-8912329 REVERSE
LENGTH=288 | 201606
Length = 288
Score = 64.3 bits (155), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 54/282 (19%)
Query: 8 ITRINGFQAEINRLQQNPSFISRILA--GIHEIYQIFSLWTLGALIL-AFLATFT----K 60
I RI F IN + +PS++SR LA G+ +++Q +S W GAL+L AF A+FT +
Sbjct: 6 INRIGDFDMGINSIN-DPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASFTSLTTR 64
Query: 61 FKLVIRRSRKVKTVLSHPSL--HTLPTQTGNVDDEEYTDGDGDGDDDDSSNCSSEFESEH 118
K ++ R R V L +L + + + + + D+ + + + + +
Sbjct: 65 IKTLVFRLRNVNVSLPSQTLLCNYDSDSDWSFSSDSSDEEKDEDDNKEDDSVNGDSRVQR 124
Query: 119 EDEQNRDEDFRVAGSRNSYEYQGYNLNHLTWSDFPTGRRVVKSWSGEFGLGLKLGLEKST 178
+ D+D ++GS P RR SG FG L LG +
Sbjct: 125 FGYYHDDDDKGISGS------------------VPWLRRC----SGSFGDLLDLG----S 158
Query: 179 ESLVSMWDFSD--------KSFFTEIKTEMLLP-AVIIPTGIENSKNVALRIWDTRVSRH 229
+V +WD D SFF++ + LL AV++ + S + + WD RV
Sbjct: 159 SGVVKLWDNLDFNGEGSPVASFFSKCGSYSLLSSAVLLAAEKKGSDGLEVSAWDARVGFG 218
Query: 230 IPEILAEWRPRWKSLPGNEDSGLANTLFSVDIRNVKKSRVDD 271
+P +LAEW+ PG L + VD+ +V K V D
Sbjct: 219 VPALLAEWKQ-----PGR----LLGKIIRVDVGDVDKIYVGD 251