BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0800.1
(345 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11780.1 | SNF2 domain protein | Chr5:3793928-3795983 FORWARD... 159 3e-44
>AT5G11780.1 | SNF2 domain protein | Chr5:3793928-3795983 FORWARD
LENGTH=504 | 201606
Length = 504
Score = 159 bits (401), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 1 MRVFFPLVSDEIRDGFNGQEIRIDDLAGVVIVESFLLSLCLKFNGNSGRSELQKELKTWA 60
+ VF P S+ +R + + + LAG+V + FLLSLC +F+ + GRSEL K+L+
Sbjct: 182 LEVFMPFASEILRKEIDSESCGVGYLAGIVASQVFLLSLCSRFDLDLGRSELDKDLQESV 241
Query: 61 VGAVTAFRNCYFFGMLLRLLLEPTLPVTSLLG--SEDEALLRKVLYDVVI-LVEYSFLTP 117
+ ++ F +C+FF ++L++LLEP L +TSL+G EDEA L +++ + VI VE FL P
Sbjct: 242 LQMISGFHSCFFFDVILKMLLEPYLHLTSLMGVVPEDEAFLTEIITEAVIKSVEKLFLNP 301
Query: 118 EGESGPSSDFMKNLAITRLIVVHEAVQVSRSNKEQTKAISYINALSNSRLPSQLVKWASY 177
+ S +KN+AI L + + + R NK+Q K Y N SNS +P L+ W
Sbjct: 302 GNGTSQRSLHLKNIAINWLFLFDKTMASLRRNKDQEKISMYTNMFSNSLIPYHLINWVIS 361
Query: 178 QTGMDQKASKLNVSSPQALLKWLLNLENQGVQVFDLKNSKLYPKLIADLSK--------L 229
Q + + A L +P + ++WL++LE QG +VF+ +SK Y K + S+ L
Sbjct: 362 QGEVIRDADTLRNLTPASFIEWLVSLEEQGPRVFNCDHSKNYAKSVIHRSRPDLSIGTTL 421
Query: 230 DNEESVFKKDKKSADE------DLFYIDSKGEGEEADNGEGDREM 268
+E F +D ADE + +++ EE N EG+ ++
Sbjct: 422 QKQEEEFDQDTDMADEQNVSSISILSRNTRKRKEERHNKEGETKV 466