BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0870.1
(490 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 482 e-166
AT4G32450.1 | Pentatricopeptide repeat (PPR) superfamily protein... 321 e-104
AT2G25580.2 | Tetratricopeptide repeat (TPR)-like superfamily pr... 305 1e-96
AT2G25580.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 305 1e-96
AT3G24000.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 291 3e-91
>AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr2:6831855-6833594 REVERSE LENGTH=579 |
201606
Length = 579
Score = 482 bits (1241), Expect = e-166, Method: Compositional matrix adjust.
Identities = 232/398 (58%), Positives = 289/398 (72%), Gaps = 11/398 (2%)
Query: 93 NNQDPNQRQAGVNQVPHYPPQNVDLMGLCREGKVKEAVDFLNQGVPADAHIFFALLDSCG 152
+NQ PNQ +N+V PP ++M LC+ K+A++ L++G D F L +SC
Sbjct: 193 SNQSPNQ----MNEVAP-PPSVEEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCA 247
Query: 153 NSKLIEEGRKVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHL 212
N K +E +KV+ ++S FRGD +LNN I MF +C S+ DA+ VFD M +K++DSWHL
Sbjct: 248 NLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHL 307
Query: 213 MMNGFAVNGQGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDF 272
MM ++ NG GDD L +FE M K G++PN+ETFL VF ACA+ +EEAF+HF+ MKN+
Sbjct: 308 MMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEH 367
Query: 273 GVAPGIEHYLGLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRA 332
G++P EHYLG++ VLGK GHL EAE++I LPFEPT WEA+ N+AR+HGDIDLED
Sbjct: 368 GISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYM 427
Query: 333 EELMVQLDPSKAVSNKLPTPPPKKRSTPNNMLEGKNRVSEFRSTTPYKGDVNEKLKGLSG 392
EELMV +DPSKAV NK+PTPPPK NM+ K+R+ EFR+ T YK + E
Sbjct: 428 EELMVDVDPSKAVINKIPTPPPKSFKE-TNMVTSKSRILEFRNLTFYKDEAKEM-----A 481
Query: 393 QMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGD 452
+ YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I TP R L IIKNLR+CGD
Sbjct: 482 AKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGD 541
Query: 453 CHNAIKIMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
CHN IKIMSKI+GR LIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 542 CHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
>AT4G32450.1 | Pentatricopeptide repeat (PPR) superfamily protein |
Chr4:15661092-15662705 FORWARD LENGTH=537 | 201606
Length = 537
Score = 321 bits (823), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 257/452 (56%), Gaps = 25/452 (5%)
Query: 56 NQGQNYPPRG---NPNPNQWNNQNQGQNYPQRGNPNPNQWNNQDPNQRQAGVNQVPHYPP 112
N+ Q+Y N W + + +Y GN P Q NN N Q H
Sbjct: 94 NRNQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVP-QENNTGGNHFQQ-----DHSGH 147
Query: 113 QNVD-LMGLCREGKVKEAVDFL----NQGVPADAHIFFALLDSCGNSKLIEEGRKVNSFL 167
++D L +CREGKVK+AV+ + N+G D F + CG+++ ++E + V+ F+
Sbjct: 148 SSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFI 207
Query: 168 MRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMNGFAVNGQGDDGL 227
S D+ N I+M+S CGS+ DA VF+ MPE+NL++W ++ FA NGQG+D +
Sbjct: 208 TSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAI 267
Query: 228 QVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVAPGIEHYLGLIDV 287
F ++ G +P+ E F +F AC + E +HFE M ++G+ P +EHY+ L+ +
Sbjct: 268 DTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKM 327
Query: 288 LGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEELMVQLDPSKAVSN 347
L + G+L+EA F+E + EP +WE LMN +R+HGD+ L DR ++++ QLD S+
Sbjct: 328 LAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKE 385
Query: 348 KLPTPPPKKRS-----TPNNMLEGKNRVSEFRS----TTPYKGDVNEKLKGLSGQMREAG 398
P K S M +G N + + + P ++ LK L M E G
Sbjct: 386 SKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIG 445
Query: 399 YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIK 458
YVP ++ LHD+DQE+K++ L H+ER A + TPAR+ +R++KNLR+C DCHNA+K
Sbjct: 446 YVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALK 505
Query: 459 IMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
+MSKIVGR+LI RD KRFHH +DG CSC +YW
Sbjct: 506 LMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT2G25580.2 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr2:10888102-10889949 FORWARD LENGTH=615 |
201606
Length = 615
Score = 305 bits (780), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 239/410 (58%), Gaps = 27/410 (6%)
Query: 105 NQVPHYPPQNVDLM-----GLCREGKVKEA---VDFL-NQGVPADAHIFFALLDSCGNSK 155
N +Y D+M C+ GKVK+A +D L + D L CG ++
Sbjct: 209 NLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAE 268
Query: 156 LIEEGRKVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMN 215
++E + V+ + S DL N+ ++M+S CG N+A VF++M EKNL++W +++
Sbjct: 269 GLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIR 328
Query: 216 GFAVNGQGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVA 275
FA NG G+D + +F ++ G P+ + F +F AC V+E +HFE M D+G+A
Sbjct: 329 CFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIA 388
Query: 276 PGIEHYLGLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEEL 335
P IE Y+ L+++ G L+EA EF+E++P EP +WE LMN +R+HG+++L D E+
Sbjct: 389 PSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEV 448
Query: 336 MVQLDPSK-----------AVSNKLPTPPPKKRSTPNNMLEG-KNRVSEFR---STTPYK 380
+ LDP++ ++ + KKRS +L G K+ + EFR + P
Sbjct: 449 VEFLDPTRLNKQSREGFIPVKASDVEKESLKKRS---GILHGVKSSMQEFRAGDTNLPEN 505
Query: 381 GDVNEKLKGLSGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 440
++ + L+ L M E GYV +TR LHDIDQE+KE LL HSER+A A ++++ R P
Sbjct: 506 DELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKP 565
Query: 441 LRIIKNLRICGDCHNAIKIMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
+IKNLR+C DCHNA+KIMS IVGR++I RD KRFH ++G C+C DYW
Sbjct: 566 FTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT2G25580.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr2:10888102-10889949 FORWARD LENGTH=615 |
201606
Length = 615
Score = 305 bits (780), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 239/410 (58%), Gaps = 27/410 (6%)
Query: 105 NQVPHYPPQNVDLM-----GLCREGKVKEA---VDFL-NQGVPADAHIFFALLDSCGNSK 155
N +Y D+M C+ GKVK+A +D L + D L CG ++
Sbjct: 209 NLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAE 268
Query: 156 LIEEGRKVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMN 215
++E + V+ + S DL N+ ++M+S CG N+A VF++M EKNL++W +++
Sbjct: 269 GLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIR 328
Query: 216 GFAVNGQGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVA 275
FA NG G+D + +F ++ G P+ + F +F AC V+E +HFE M D+G+A
Sbjct: 329 CFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIA 388
Query: 276 PGIEHYLGLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEEL 335
P IE Y+ L+++ G L+EA EF+E++P EP +WE LMN +R+HG+++L D E+
Sbjct: 389 PSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEV 448
Query: 336 MVQLDPSK-----------AVSNKLPTPPPKKRSTPNNMLEG-KNRVSEFR---STTPYK 380
+ LDP++ ++ + KKRS +L G K+ + EFR + P
Sbjct: 449 VEFLDPTRLNKQSREGFIPVKASDVEKESLKKRS---GILHGVKSSMQEFRAGDTNLPEN 505
Query: 381 GDVNEKLKGLSGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTP 440
++ + L+ L M E GYV +TR LHDIDQE+KE LL HSER+A A ++++ R P
Sbjct: 506 DELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKP 565
Query: 441 LRIIKNLRICGDCHNAIKIMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
+IKNLR+C DCHNA+KIMS IVGR++I RD KRFH ++G C+C DYW
Sbjct: 566 FTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
>AT3G24000.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr3:8672774-8674675 FORWARD LENGTH=633 |
201606
Length = 633
Score = 291 bits (745), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 250/406 (61%), Gaps = 32/406 (7%)
Query: 114 NVDLMGLCREGKVKEAVDFLNQGVPAD----AHIFFA-LLDSCGNSKLIEEGRKVNSFLM 168
N + G R ++A++ L QG+ D +H +A L +C ++ +E+G+ V+++++
Sbjct: 231 NALIAGHARRSGTEKALE-LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 169 RSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMNGFAVNGQGDDGLQ 228
+S + N +DM++K GS++DAR +FDR+ ++++ SW+ ++ +A +G G + +
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 229 VFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVAPGIEHYLGLIDVL 288
FE MR++G++PN+ +FL+V AC+ + ++E + ++ELMK D G+ P HY+ ++D+L
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408
Query: 289 GKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEELMVQLDP------- 341
G++G LN A FIE++P EPT IW+AL+N R+H + +L A E + +LDP
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 342 --------------SKAVSNKLPTPPPKKRSTPNNMLEGKNRVSEFRSTT---PYKGDVN 384
+ V K+ KK + +E +N + F + P + ++
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACS-WVEIENAIHMFVANDERHPQREEIA 527
Query: 385 EKLKGLSGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 444
K + + +++E GYVPDT +V+ +DQ+ +E L YHSE++A+A+ L++TP + + I
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587
Query: 445 KNLRICGDCHNAIKIMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
KN+R+CGDCH AIK+ SK+VGR++IVRD RFHHF+DG CSC DYW
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 75/124 (60%)
Query: 131 DFLNQGVPADAHIFFALLDSCGNSKLIEEGRKVNSFLMRSPFRGDLQLNNKSIDMFSKCG 190
D +PAD + LL C KL+ +GR V++ +++S FR D+ + N ++M++KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 191 SMNDARGVFDRMPEKNLDSWHLMMNGFAVNGQGDDGLQVFEHMRKLGVQPNQETFLAVFA 250
S+ +AR VF++MP+++ +W +++G++ + + D L F M + G PN+ T +V
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 251 ACAS 254
A A+
Sbjct: 170 AAAA 173
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 160 GRKVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMNGFAV 219
G +++ F ++ F ++ + + +D++++ G M+DA+ VFD + +N SW+ ++ G A
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 220 NGQGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEA-FIHFELMKNDFGVAPGI 278
+ L++F+ M + G +P+ ++ ++F AC+S +E+ ++H ++K+ +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS----GEKL 295
Query: 279 EHYLG--LIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHG 324
+ G L+D+ KSG +++A + ++L W +L+ HG
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 342