BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0950.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 1e-31
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 1e-31
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 68 3e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (294), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/109 (45%), Positives = 75/109 (68%)
Query: 3 SMSENQVWDLVDLPDGVKPIECKWVFKMKIDKDGNLSIFKARLVAKGYLQIHRIDYYKTF 62
+M W++ LP KPI CKWV+K+K + DG + +KARLVAKGY Q ID+ +TF
Sbjct: 108 AMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETF 167
Query: 63 FSVAMLKSIRIILAIAAHYDYEICQMDVKTSFLNGNLEEDVYMTKPEGF 111
V L S+++ILAI+A Y++ + Q+D+ +FLNG+L+E++YM P G+
Sbjct: 168 SPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (294), Expect = 1e-31, Method: Composition-based stats.
Identities = 50/109 (45%), Positives = 75/109 (68%)
Query: 3 SMSENQVWDLVDLPDGVKPIECKWVFKMKIDKDGNLSIFKARLVAKGYLQIHRIDYYKTF 62
+M W++ LP KPI CKWV+K+K + DG + +KARLVAKGY Q ID+ +TF
Sbjct: 108 AMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETF 167
Query: 63 FSVAMLKSIRIILAIAAHYDYEICQMDVKTSFLNGNLEEDVYMTKPEGF 111
V L S+++ILAI+A Y++ + Q+D+ +FLNG+L+E++YM P G+
Sbjct: 168 SPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 68.2 bits (165), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%)
Query: 1 MDSMSENQVWDLVDLPDGVKPIECKWVFKMKIDKDGNLSIFKARLVAKGYLQIHRIDYYK 60
+D++S N+ W LV P + CKWVFK K+ DG L KARLVAKG+ Q I + +
Sbjct: 48 LDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVE 107
Query: 61 TFFSVAMLKSIRIILAIAAHYD 82
T+ V +IR IL +A +
Sbjct: 108 TYSPVVRTATIRTILNVAQQLE 129