BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0980.1
(417 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 222 7e-64
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 222 7e-64
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 126 9e-34
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 68 9e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 222 bits (565), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 207/374 (55%), Gaps = 18/374 (4%)
Query: 1 MDVKTAFLNGSLDEEVYMEQPEGYS----EAGMEHMVCKHNKSIYGLKQASRQWFLKFND 56
+D+ AFLNG LDEE+YM+ P GY+ ++ + VC KSIYGLKQASRQWFLKF+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 57 TITAFGFKENIVDQCIYQKASGSKFIYLVLYVDDTLLATNDLGLLYDTKKFL-SNFEMKD 115
T+ FGF ++ D + K + + F+ +++YVDD ++ +N+ + + K L S F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 116 MDEANFVIGIEIFRDRKQGLLGLSQKKYIERVLERFGMKECSPIETPIMKGDKFNLMQCP 175
+ + +G+EI R + + Q+KY +L+ G+ C P P+ F+
Sbjct: 313 LGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-AHSG 369
Query: 176 QNDLEKKGMGNIPYASAVGSLMYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRY 235
+ ++ K Y +G LMY QI TR DISF V L ++ P +AH +A +++ Y
Sbjct: 370 GDFVDAKA-----YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 236 LQGTEDYKLIFRRTDNLEVKGYSDSDFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYA 295
++GT L + ++++ +SD+ F C D+R+ST+GY L ISW+S KQ + +
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 296 SCTMEAKFVARYEATIHALWLRNFISGLGTVDSIDKPLRIYCDNNAAVYFSKNDKYSSSR 355
+ EA++ A AT +WL F L + KP ++CDN AA++ + N +
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHER- 540
Query: 356 GSKHLELKYLIVKE 369
+KH+E V+E
Sbjct: 541 -TKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 222 bits (565), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 207/374 (55%), Gaps = 18/374 (4%)
Query: 1 MDVKTAFLNGSLDEEVYMEQPEGYS----EAGMEHMVCKHNKSIYGLKQASRQWFLKFND 56
+D+ AFLNG LDEE+YM+ P GY+ ++ + VC KSIYGLKQASRQWFLKF+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252
Query: 57 TITAFGFKENIVDQCIYQKASGSKFIYLVLYVDDTLLATNDLGLLYDTKKFL-SNFEMKD 115
T+ FGF ++ D + K + + F+ +++YVDD ++ +N+ + + K L S F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312
Query: 116 MDEANFVIGIEIFRDRKQGLLGLSQKKYIERVLERFGMKECSPIETPIMKGDKFNLMQCP 175
+ + +G+EI R + + Q+KY +L+ G+ C P P+ F+
Sbjct: 313 LGPLKYFLGLEI--ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-AHSG 369
Query: 176 QNDLEKKGMGNIPYASAVGSLMYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRY 235
+ ++ K Y +G LMY QI TR DISF V L ++ P +AH +A +++ Y
Sbjct: 370 GDFVDAKA-----YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 423
Query: 236 LQGTEDYKLIFRRTDNLEVKGYSDSDFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYA 295
++GT L + ++++ +SD+ F C D+R+ST+GY L ISW+S KQ + +
Sbjct: 424 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 483
Query: 296 SCTMEAKFVARYEATIHALWLRNFISGLGTVDSIDKPLRIYCDNNAAVYFSKNDKYSSSR 355
+ EA++ A AT +WL F L + KP ++CDN AA++ + N +
Sbjct: 484 KSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHER- 540
Query: 356 GSKHLELKYLIVKE 369
+KH+E V+E
Sbjct: 541 -TKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 126 bits (317), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 11/235 (4%)
Query: 82 IYLVLYVDDTLLATNDLGLL-YDTKKFLSNFEMKDMDEANFVIGIEIFRDRKQGLLGLSQ 140
+YL+LYVDD LL + LL + S F MKD+ ++ +GI+I + GL LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLF-LSQ 58
Query: 141 KKYIERVLERFGMKECSPIETPIMKGDKFNLMQCPQNDLEKKGMGNIPYASAVGSLMYAQ 200
KY E++L GM +C P+ TP+ ++ D + S VG+L Y
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD-------FRSIVGALQYLT 111
Query: 201 ICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRYLQGTEDYKLIFRRTDNLEVKGYSDS 260
+ TRPDIS+ V ++ + P +A + KRV+RY++GT + L + L V+ + DS
Sbjct: 112 L-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDS 170
Query: 261 DFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYASCTMEAKFVARYEATIHALW 315
D+AGC +R+ST+G+ L ISW + +Q + + E ++ A W
Sbjct: 171 DWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.8 bits (164), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 197 MYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRYLQGTEDYKLIFRRTDNLEVKG 256
MY I TRPD++F V L ++ S A +A +V+ Y++GT L + T +L++K
Sbjct: 1 MYLTI-TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 257 YSDSDFAGCADSRKSTSGYVFLL 279
++DSD+A C D+R+S +G+ L+
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82