BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1030.1
(257 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 204 6e-60
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 204 6e-60
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 159 9e-48
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 54 2e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 204 bits (520), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 153/246 (62%), Gaps = 1/246 (0%)
Query: 1 MKDLGPLKYFLGIEVSRSSNEIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPN 60
++DLGPLKYFLG+E++RS+ I + QRKY LDLL E G+ C+P P++ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLACALSIVSQFMHNLGEKHMNVVLRILRYLKAAPR 120
VD Y+RL+GRLMYL TR D++ A++ +SQF H V++IL Y+K
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 121 KGILLTKNSSCRTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
+G+ + + + + V++DA + + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 SEFKGMTDGICEALWLRLVLDDLGYPSERPIQLYCDNKATCDIAHNPVQHDRTKHVEVDR 240
+E++ ++ E +WL +L P +P L+CDN A IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 CFIKEK 246
++E+
Sbjct: 549 HSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 204 bits (520), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 153/246 (62%), Gaps = 1/246 (0%)
Query: 1 MKDLGPLKYFLGIEVSRSSNEIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPN 60
++DLGPLKYFLG+E++RS+ I + QRKY LDLL E G+ C+P P++ + S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLACALSIVSQFMHNLGEKHMNVVLRILRYLKAAPR 120
VD Y+RL+GRLMYL TR D++ A++ +SQF H V++IL Y+K
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 121 KGILLTKNSSCRTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
+G+ + + + + V++DA + + RRST GY F+G +L++W+SKKQ VV++SSAE
Sbjct: 430 QGLFYSSQAEMQ-LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAE 488
Query: 181 SEFKGMTDGICEALWLRLVLDDLGYPSERPIQLYCDNKATCDIAHNPVQHDRTKHVEVDR 240
+E++ ++ E +WL +L P +P L+CDN A IA N V H+RTKH+E D
Sbjct: 489 AEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDC 548
Query: 241 CFIKEK 246
++E+
Sbjct: 549 HSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 159 bits (401), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 119/195 (61%), Gaps = 2/195 (1%)
Query: 1 MKDLGPLKYFLGIEVSRSSNEIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPN 60
MKDLGP+ YFLGI++ + +FLSQ KY +L+ GM C+P+ TP+ L SV
Sbjct: 33 MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92
Query: 61 QIPVDKGRYQRLVGRLMYLAHTRPDLACALSIVSQFMHNLGEKHMNVVLRILRYLKAAPR 120
+ P D ++ +VG L YL TRPD++ A++IV Q MH +++ R+LRY+K
Sbjct: 93 KYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIF 151
Query: 121 KGILLTKNSSCRTIDVYTDADWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAE 180
G+ + KNS + + D+DWAG + RRST G+ TF+G N+++W +K+Q V+RSS E
Sbjct: 152 HGLYIHKNSKLN-VQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTE 210
Query: 181 SEFKGMTDGICEALW 195
+E++ + E W
Sbjct: 211 TEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 54.3 bits (129), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 77 MYLAHTRPDLACALSIVSQFMHNLGEKHMNVVLRILRYLKAAPRKGILLTKNSSCRTIDV 136
MYL TRPDL A++ +SQF M V ++L Y+K +G+ + S + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 137 YTDADWAGEVNGRRSTAGYFTFV 159
+ D+DWA + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82