BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1130.1
(96 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29660.1 | embryo defective 2752 | Chr4:14534495-14535171 REV... 134 2e-42
>AT4G29660.1 | embryo defective 2752 | Chr4:14534495-14535171
REVERSE LENGTH=103 | 201606
Length = 103
Score = 134 bits (337), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 77/89 (86%)
Query: 5 LWKRYSEYLYNKWEKTILWDMIDPYRRPKSFKPLIVIYVAAFYTGVIGSAITEQLHKEKY 64
LW++Y++Y YNK+E+ +W+MI+PYRRPK+F LI IYVAAFYTGVIG+A+TEQL+KEK+
Sbjct: 8 LWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKEKF 67
Query: 65 WEEHPGEAVPLMKPKFYWGPWKVLREDHV 93
WEEHPG+ VPLMKP FY GPW+V R + +
Sbjct: 68 WEEHPGKTVPLMKPVFYRGPWRVYRGEAI 96