BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g1180.1
         (288 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00750.1 | GAG/POL/ENV polyprotein | ChrM:220830-221189 FORWA...    77   1e-17

>ATMG00750.1 | GAG/POL/ENV polyprotein | ChrM:220830-221189
          FORWARD LENGTH=119 | 201606
          Length = 119

 Score = 77.4 bits (189), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 42/56 (75%)

Query: 32 ILQCGFYWPSIFKDAYQFCKACDRCQRVGCMTRRDMMPLNPILIVELFDVWGIDFM 87
          +LQ GFYWP+ FKDA+ F  +CD CQR G  T+R+ MP + IL VE+FDVWGI FM
Sbjct: 35 VLQAGFYWPTTFKDAHGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90


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