BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1230.1
(451 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21330.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 221 1e-67
AT4G00120.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 121 6e-32
AT5G67060.2 | basic helix-loop-helix (bHLH) DNA-binding superfam... 115 2e-29
AT5G67060.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 115 2e-29
AT3G50330.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 112 3e-28
>AT3G21330.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr3:7507720-7508841 FORWARD LENGTH=373 |
201606
Length = 373
Score = 221 bits (562), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/302 (47%), Positives = 187/302 (61%), Gaps = 24/302 (7%)
Query: 157 SLDCLMSSDNNNTTTSVENQESMGSMIFPDCRNLWDFGSMSTSGVSTSVEFQNNEQKKEL 216
SLDCL+S+ +N+ TS E+ E + S++F DC+ LW FG GVS++ +E ++
Sbjct: 87 SLDCLLSATSNSNNTSTEDDEGI-SVLFSDCQTLWSFG-----GVSSA----ESENREIT 136
Query: 217 LLHPISELDETVSQASSNHCFNNINDGCPRPSNSKKKEREPFKENVNYPYFNPSQSHSFT 276
+ + + + S K+ R + +F+ +
Sbjct: 137 TETTTTIKPKPLKRNRGGDGGTTETTTTTTKPKSLKRNRG----DETGSHFSLVHPQDDS 192
Query: 277 RETGFRLISDD-QSKLKKSQLD----NSSTISFQLRDSSVSPVDEPDTEAIAQMKEMIYR 331
+ GF+LI D+ QSK KK + + SS ISFQ + +S EPD EAIAQMKEMIYR
Sbjct: 193 EKGGFKLIYDENQSKSKKPRTEKERGGSSNISFQ-HSTCLSDNVEPDAEAIAQMKEMIYR 251
Query: 332 AAAFRPVNLGQEVVEKRKRKNVRISSDPQTVAARQRRERISERIRVLQRLVPGGSKMDTA 391
AAAFRPVN G E+VEK KRKNV+IS+DPQTVAARQRRERISE+IRVLQ LVPGG+KMDTA
Sbjct: 252 AAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTA 311
Query: 392 SMLDEAANYLKFLKAQVKALENLGHRYDPSNFTSRNLPLLSAPQFNNTFA-MQTP--FHF 448
SMLDEAANYLKFL+AQVKALENL + D +N + + P S P F+ +F +Q P H
Sbjct: 312 SMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAP-TSFPLFHPSFLPLQNPNQIHH 370
Query: 449 PK 450
P+
Sbjct: 371 PE 372
>AT4G00120.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr4:42601-43197 REVERSE LENGTH=198 | 201606
Length = 198
Score = 121 bits (303), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 69/88 (78%)
Query: 325 MKEMIYRAAAFRPVNLGQEVVEKRKRKNVRISSDPQTVAARQRRERISERIRVLQRLVPG 384
MKEM Y A +PV++ V K R+NVRIS DPQTV AR+RRERISE+IR+L+R+VPG
Sbjct: 88 MKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPG 147
Query: 385 GSKMDTASMLDEAANYLKFLKAQVKALE 412
G+KMDTASMLDEA Y KFLK QV+ L+
Sbjct: 148 GAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>AT5G67060.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr5:26766312-26767001 FORWARD LENGTH=229 |
201606
Length = 229
Score = 115 bits (288), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 105/163 (64%), Gaps = 18/163 (11%)
Query: 260 ENVNYPY-FNPSQ---SHSFTRETGFRLISDDQSKLKKSQLDNSSTISFQLRDSSV---- 311
N YP+ FN + HS T E GFR S L N S+IS SSV
Sbjct: 19 HNNTYPFLFNSTHYQSDHSMTNEPGFRYGS--------GLLTNPSSISPNTAYSSVFLDK 70
Query: 312 --SPVDEPDTEAIAQMKEMIYRAAAFRPVNLGQEVVEKRKRKNVRISSDPQTVAARQRRE 369
+ + + +A M+EMI+R A +P+++ E V+ KR+NVRIS DPQ+VAAR RRE
Sbjct: 71 RNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRE 130
Query: 370 RISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKAQVKALE 412
RISERIR+LQRLVPGG+KMDTASMLDEA +Y+KFLK QV++LE
Sbjct: 131 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 173
>AT5G67060.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr5:26766276-26767001 FORWARD LENGTH=241 |
201606
Length = 241
Score = 115 bits (288), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 105/163 (64%), Gaps = 18/163 (11%)
Query: 260 ENVNYPY-FNPSQ---SHSFTRETGFRLISDDQSKLKKSQLDNSSTISFQLRDSSV---- 311
N YP+ FN + HS T E GFR S L N S+IS SSV
Sbjct: 31 HNNTYPFLFNSTHYQSDHSMTNEPGFRYGS--------GLLTNPSSISPNTAYSSVFLDK 82
Query: 312 --SPVDEPDTEAIAQMKEMIYRAAAFRPVNLGQEVVEKRKRKNVRISSDPQTVAARQRRE 369
+ + + +A M+EMI+R A +P+++ E V+ KR+NVRIS DPQ+VAAR RRE
Sbjct: 83 RNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRE 142
Query: 370 RISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKAQVKALE 412
RISERIR+LQRLVPGG+KMDTASMLDEA +Y+KFLK QV++LE
Sbjct: 143 RISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185
>AT3G50330.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr3:18657423-18658118 REVERSE LENGTH=231 |
201606
Length = 231
Score = 112 bits (279), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%)
Query: 318 DTEAIAQMKEMIYRAAAFRPVNLGQEVVEKRKRKNVRISSDPQTVAARQRRERISERIRV 377
D +A M+EMI+R A +P+++ E V+ KRKNVRIS DPQ+VAAR RRERISERIR+
Sbjct: 88 DNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRI 147
Query: 378 LQRLVPGGSKMDTASMLDEAANYLKFLKAQVKALE 412
LQRLVPGG+KMDTASMLDEA +Y+KFLK QV++LE
Sbjct: 148 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182