BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1260.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19830.1 | SNF7 family protein | Chr2:8558101-8559076 REVERSE... 59 2e-11
AT2G19830.2 | SNF7 family protein | Chr2:8558101-8559389 REVERSE... 59 3e-11
AT4G29160.2 | SNF7 family protein | Chr4:14381350-14382342 FORWA... 43 1e-05
AT4G29160.3 | SNF7 family protein | Chr4:14381019-14382342 FORWA... 43 2e-05
AT4G29160.1 | SNF7 family protein | Chr4:14381019-14382342 FORWA... 43 2e-05
>AT2G19830.1 | SNF7 family protein | Chr2:8558101-8559076 REVERSE
LENGTH=194 | 201606
Length = 194
Score = 59.3 bits (142), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 57/111 (51%), Gaps = 32/111 (28%)
Query: 5 QTMDEINEQTENIKQIQEALSTLLAQLPTSIRTIIYFPFPKSHQNIYSKDSTFEFQNELE 64
+TMDEINEQTEN+KQIQEALS PF + D +
Sbjct: 106 KTMDEINEQTENMKQIQEALSA---------------PF-------GANDFDEDELEAEL 143
Query: 65 DELEGAALEEQLLQPT----------TTASYAKKNSTEEDELASLQAEMTL 105
DELEGA LEEQLLQP A K+ + EEDELA+LQAEM L
Sbjct: 144 DELEGAELEEQLLQPVPIHVPQGNKPARAPAQKQPTAEEDELAALQAEMAL 194
>AT2G19830.2 | SNF7 family protein | Chr2:8558101-8559389 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 58.9 bits (141), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 57/111 (51%), Gaps = 32/111 (28%)
Query: 5 QTMDEINEQTENIKQIQEALSTLLAQLPTSIRTIIYFPFPKSHQNIYSKDSTFEFQNELE 64
+TMDEINEQTEN+KQIQEALS PF + D +
Sbjct: 125 KTMDEINEQTENMKQIQEALSA---------------PF-------GANDFDEDELEAEL 162
Query: 65 DELEGAALEEQLLQPT----------TTASYAKKNSTEEDELASLQAEMTL 105
DELEGA LEEQLLQP A K+ + EEDELA+LQAEM L
Sbjct: 163 DELEGAELEEQLLQPVPIHVPQGNKPARAPAQKQPTAEEDELAALQAEMAL 213
>AT4G29160.2 | SNF7 family protein | Chr4:14381350-14382342 FORWARD
LENGTH=192 | 201606
Length = 192
Score = 43.1 bits (100), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 3 FHQTMDEINEQTENIKQIQEALSTLLA 29
+TMDEINEQTEN+KQIQEAL+T +
Sbjct: 95 VDKTMDEINEQTENMKQIQEALATPMG 121
>AT4G29160.3 | SNF7 family protein | Chr4:14381019-14382342 FORWARD
LENGTH=219 | 201606
Length = 219
Score = 42.7 bits (99), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 3 FHQTMDEINEQTENIKQIQEALSTLLA 29
+TMDEINEQTEN+KQIQEAL+T +
Sbjct: 122 VDKTMDEINEQTENMKQIQEALATPMG 148
>AT4G29160.1 | SNF7 family protein | Chr4:14381019-14382342 FORWARD
LENGTH=219 | 201606
Length = 219
Score = 42.7 bits (99), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 3 FHQTMDEINEQTENIKQIQEALSTLLA 29
+TMDEINEQTEN+KQIQEAL+T +
Sbjct: 122 VDKTMDEINEQTENMKQIQEALATPMG 148