BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g1290.1
         (291 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1...    89   5e-20
ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase...    62   5e-12

>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
           Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
          Length = 376

 Score = 89.4 bits (220), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 55/85 (64%)

Query: 52  LANRLKLVLPEIISPFQAAFVPGRQITDNIIISQELSHSFKRKKGAKSYFGLKLDMSKAF 111
           +  RLK ++  +I P QA+F+PGR  TDNI+  QE  HS +RKKG K +  LKLD+ KA+
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 112 DRVEWSFLEKIMALLGFADHWINMI 136
           DR+ W +LE  +   GF + W+  I
Sbjct: 61  DRIRWDYLEDTLISAGFPEVWLPEI 85


>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
           ChrM:310514-310882 FORWARD LENGTH=122 | 201606
          Length = 122

 Score = 62.4 bits (150), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 38/70 (54%)

Query: 145 MAILINGRPGSNFNVSRGIRQGDPLSPFLFTLAMEGLSRLLESKNNQHHFIGFKFPKSDL 204
           +  +ING P      SRG+RQGDPLSP+LF L  E LS L      Q    G +   +  
Sbjct: 10  LLFIINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSP 69

Query: 205 TITHLLFADD 214
            I HLLFADD
Sbjct: 70  RINHLLFADD 79


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