BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g1460.1
         (142 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447...    73   3e-16

>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
           Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
          Length = 237

 Score = 73.2 bits (178), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)

Query: 22  DVHHSDSPTTILITPLLTG-DNYASWSRAMKMALRAKDKFGFVDGSIPKPTSPNQLHS-W 79
           D+HH   P+   I  L    DNY +W    +  LR   KFGF+DG++PKP   + L+  W
Sbjct: 23  DIHH---PSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPW 79

Query: 80  GKCNDLVSSWIINSIAPDIRSSVLYDESAADIWRNLYERF 119
            +CN +V  W++NS+   +  SV+Y E+A  +W +L   F
Sbjct: 80  EQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVF 119

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