BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g1470.1
         (538 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    57   1e-09

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 57.4 bits (137), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 221 GDLHEGLYFLRTDIRICSFSISSNSLYNKDVSDIWHWRLGHPSSSIFKSLISRTQCLKSV 280
           G+ H+ LY L+  +     +++  +   KD + +WH RL H S    + L+ +     S 
Sbjct: 41  GNRHDSLYILQGSVETGESNLAETA---KDETRLWHSRLAHMSQRGMELLVKKGFLDSSK 97

Query: 281 SFNKNPCEICPLSKFTRLSFPLSNSTSSRPFELIHADLWGPFSVP 325
             +   CE C   K  R++F     T+  P + +H+DLWG  SVP
Sbjct: 98  VSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142

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