BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1600.1
(143 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19790.1 | SNARE-like superfamily protein | Chr2:8527302-8528... 268 3e-94
AT2G17380.1 | associated protein 19 | Chr2:7553122-7554887 FORWA... 124 5e-37
AT1G47830.1 | SNARE-like superfamily protein | Chr1:17613346-176... 124 6e-37
AT4G35410.2 | Clathrin adaptor complex small chain family protei... 124 7e-37
AT3G50860.2 | Clathrin adaptor complex small chain family protei... 113 8e-33
>AT2G19790.1 | SNARE-like superfamily protein | Chr2:8527302-8528395
FORWARD LENGTH=143 | 201606
Length = 143
Score = 268 bits (686), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 125/142 (88%), Positives = 138/142 (97%)
Query: 1 MGIRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIY 60
MGIRFILMVNKQGQTRLAQYYE+LT+++RRALEGEIVRKCL R + QCSFVEHRNYK++Y
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVY 60
Query: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVV 120
RRYASLFF+VGVD+DENELAILEFIHLLVETMD+HFGNVCELDIMFHLEKAHFMLEEMV+
Sbjct: 61 RRYASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVM 120
Query: 121 NGCIVETNKSNILMPIQLMDKA 142
NGCIVET+K+NIL PIQLMDKA
Sbjct: 121 NGCIVETSKANILSPIQLMDKA 142
>AT2G17380.1 | associated protein 19 | Chr2:7553122-7554887 FORWARD
LENGTH=161 | 201606
Length = 161
Score = 124 bits (312), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 94/139 (67%)
Query: 3 IRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIYRR 62
I F+L+V++QG+ RL ++Y T +R + E+ L R C+F+E R YKV+Y+R
Sbjct: 2 IHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKR 61
Query: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVVNG 122
YASL+F + +D +NEL +LE IH VE +DR+FG+VCELD++F+ KA+++L+E+++ G
Sbjct: 62 YASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121
Query: 123 CIVETNKSNILMPIQLMDK 141
+ E++K + I D+
Sbjct: 122 ELQESSKKTVARIISAQDQ 140
>AT1G47830.1 | SNARE-like superfamily protein |
Chr1:17613346-17614784 REVERSE LENGTH=142 | 201606
Length = 142
Score = 124 bits (310), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 93/139 (66%)
Query: 3 IRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIYRR 62
IRFIL+ N+QG+TRLA+YY L ++ +E E+ R + R +FVE R +KVIYRR
Sbjct: 2 IRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRR 61
Query: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVVNG 122
YA LFF V VD +NELA LE IHL VE +D F NVCELD++F+ K + +L+E ++ G
Sbjct: 62 YAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAG 121
Query: 123 CIVETNKSNILMPIQLMDK 141
+ ET+K I+ + ++K
Sbjct: 122 ELQETSKRAIIERMSELEK 140
>AT4G35410.2 | Clathrin adaptor complex small chain family protein |
Chr4:16832572-16833796 FORWARD LENGTH=162 | 201606
Length = 162
Score = 124 bits (311), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 94/139 (67%)
Query: 3 IRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIYRR 62
I F+L+V++QG+ RL ++Y +R + E+ L R C+FVE R YKV+Y+R
Sbjct: 2 IHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKR 61
Query: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVVNG 122
YASL+F + +D ++NEL +LE IH VE +DR+FG+VCELD++F+ KA+++L+E+++ G
Sbjct: 62 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121
Query: 123 CIVETNKSNILMPIQLMDK 141
+ E++K + I D+
Sbjct: 122 ELQESSKKTVARIISAQDQ 140
>AT3G50860.2 | Clathrin adaptor complex small chain family protein |
Chr3:18902346-18903806 FORWARD LENGTH=145 | 201606
Length = 145
Score = 113 bits (283), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 97/144 (67%), Gaps = 5/144 (3%)
Query: 3 IRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVE-----HRNYK 57
I+ ++M+N QG+ RLA++Y+YL +++++ L + R EN +F+E + +
Sbjct: 2 IKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDSR 61
Query: 58 VIYRRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEE 117
++Y+ YA+L+F++ D ENELA+L+ I +LVET+D+ F NVCELDI+F+ K H +L+E
Sbjct: 62 LVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLDE 121
Query: 118 MVVNGCIVETNKSNILMPIQLMDK 141
+V G ++ET+ + ++ ++ + K
Sbjct: 122 IVFGGQVLETSSAEVMKAVEEISK 145