BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1650.1
(243 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 141 5e-38
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 141 5e-38
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 118 3e-32
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 66 1e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 141 bits (355), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 1/208 (0%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
+L C+P+ M+ + + Y+RL+G+L+YL TR DI++ V+ +SQF
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
AP AH AV +IL Y+K G+GL +SS + +++A + RRST+GY
Sbjct: 408 APR-LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLWIRNLMKELGFKSQQAMELHYDSK 180
+G +L++W+S KQ+VV +SS E EYR+++ E++W+ +EL + L D+
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 181 ATIDIANNPVQNDTTKHFEVDRHLIKEK 208
A I IA N V ++ TKH E D H ++E+
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 141 bits (355), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 119/208 (57%), Gaps = 1/208 (0%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
+L C+P+ M+ + + Y+RL+G+L+YL TR DI++ V+ +SQF
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
AP AH AV +IL Y+K G+GL +SS + +++A + RRST+GY
Sbjct: 408 APR-LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLWIRNLMKELGFKSQQAMELHYDSK 180
+G +L++W+S KQ+VV +SS E EYR+++ E++W+ +EL + L D+
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 181 ATIDIANNPVQNDTTKHFEVDRHLIKEK 208
A I IA N V ++ TKH E D H ++E+
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 118 bits (295), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
MLDC+P T + + + P D ++ +VG L YL+ TRPDI+Y V++V Q MH
Sbjct: 71 MLDCKPMSTPLPLKLNSSVSTAKYPDPSD-FRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
P+ A D + R+LRY+K GL + + + + ++DWA + RRST+G+ T
Sbjct: 130 EPT-LADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 188
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLW 157
+G N+++W + +Q V RSS E EYR++A EL W
Sbjct: 189 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 65.9 bits (159), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 39 IYLSHTRPDIAYVVSVVSQFMHAPSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEG 98
+YL+ TRPD+ + V+ +SQF A S A M AV ++L Y+K G+GL +S+ +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSA-SRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 99 YTNADWADNVTDRRSTSGYFTIV 121
+ ++DWA RRS +G+ ++V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82