BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1660.1
(221 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-47
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-47
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 62 5e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (422), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 4/166 (2%)
Query: 59 KQTVECKWTYTVKYKADGTIKRYKARLIAKGYTQTHGIDYSETFVPVAKMNIVRVLISLA 118
K+ + CKW Y +KY +DGTI+RYKARL+AKGYTQ GID+ ETF PV K+ V+++++++
Sbjct: 124 KKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183
Query: 119 ANLNWPSQQFDIKNASLHGDL-EEVYTDPPPEC---KKNSIKSNVVCKLKKSLYRLKQSP 174
A N+ Q DI NA L+GDL EE+Y PP + +S+ N VC LKKS+Y LKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 175 RAWFGRFSKCMRTFGYEQSNVDYTLFFKHKNSKITCLVVYVNDMIV 220
R WF +FS + FG+ QS+ D+T F K + C++VYV+D+I+
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIII 289
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (422), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 114/166 (68%), Gaps = 4/166 (2%)
Query: 59 KQTVECKWTYTVKYKADGTIKRYKARLIAKGYTQTHGIDYSETFVPVAKMNIVRVLISLA 118
K+ + CKW Y +KY +DGTI+RYKARL+AKGYTQ GID+ ETF PV K+ V+++++++
Sbjct: 124 KKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAIS 183
Query: 119 ANLNWPSQQFDIKNASLHGDL-EEVYTDPPPEC---KKNSIKSNVVCKLKKSLYRLKQSP 174
A N+ Q DI NA L+GDL EE+Y PP + +S+ N VC LKKS+Y LKQ+
Sbjct: 184 AIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQAS 243
Query: 175 RAWFGRFSKCMRTFGYEQSNVDYTLFFKHKNSKITCLVVYVNDMIV 220
R WF +FS + FG+ QS+ D+T F K + C++VYV+D+I+
Sbjct: 244 RQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIII 289
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 62.4 bits (150), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 55 PTEGKQTVECKWTYTVKYKADGTIKRYKARLIAKGYTQTHGIDYSETFVPVAKMNIVRVL 114
P + + CKW + K +DGT+ R KARL+AKG+ Q GI + ET+ PV + +R +
Sbjct: 62 PPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTI 121
Query: 115 ISLAANL 121
+++A L
Sbjct: 122 LNVAQQL 128