BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g1770.1
         (148 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447...    55   9e-10

>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
           Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
          Length = 237

 Score = 55.5 bits (132), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 8/131 (6%)

Query: 8   PSISAYSPILESYDVHHSDSPTTIHITPLLI-EDNYVSWSREMKMILRAKEKFGFDVNGS 66
           P+    SP     D+HH   P+   I  L   EDNYV+W    +  LR  +KFGF ++G+
Sbjct: 10  PTSDPDSPYYLPPDIHH---PSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGF-IDGT 65

Query: 67  FLKPIAASKI-RSWEHCNDLVGSRILNFVFPDIF-IILYDECI-EIWVDLHDRSSKLMPL 123
             KP   S + + WE CN +V   ++N +   +   ++Y E   ++W DL       + L
Sbjct: 66  LPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDL 125

Query: 124 KFFNLKEQLLT 134
           K + L+ +L T
Sbjct: 126 KIYQLRRRLAT 136

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