BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1860.1
(382 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07870.1 | F-box and associated interaction domains-containin... 82 6e-17
AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWAR... 76 7e-15
AT5G65850.1 | F-box and associated interaction domains-containin... 72 1e-13
AT1G53550.1 | F-box family protein | Chr1:19983411-19984637 FORW... 68 2e-12
AT3G23880.1 | F-box and associated interaction domains-containin... 61 6e-10
>AT3G07870.1 | F-box and associated interaction domains-containing
protein | Chr3:2510871-2512124 FORWARD LENGTH=417 |
201606
Length = 417
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 32/264 (12%)
Query: 1 MEKLHPNIVEEIVSRVPPESIVQAKLVCKTWESVLRNKKYGILMSFGKEYDEETSVELYY 60
+E L +I+ +I SR+P SI + VC++W SVL ++G L S + +
Sbjct: 25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVL--TQHGRLSSSSSSPTKPCLLLHCD 82
Query: 61 GDFDDIINYNDNRPLYSRPMVKIDHPPIGKREFRDTILGSCNGLVCFSIPHQNILDPVHI 120
+ +++ D R K ++GSCNGL+C S N D +++
Sbjct: 83 SPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYN--DSLYL 140
Query: 121 CNPFTGEYFNLPRLHGIERYSSFVARGFGYLQSTNEYKVLRIYYPKRESKPPEGF----- 175
NPFT LP + + + GFG+ + T EYKVL+I Y + S G
Sbjct: 141 YNPFTTNSLELPECSN-KYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRG 199
Query: 176 --------VQVYTLG-----DGRGWRNIEGTINYMLTEYMSGGTFGPNGAINFMTK---- 218
VQ+ TL WR++ G Y + S NG ++F+T+
Sbjct: 200 RIQYKQSEVQILTLSSKTTDQSLSWRSL-GKAPYKFVKRSSEALV--NGRLHFVTRPRRH 256
Query: 219 --DYKIVGFDLREEKFRVLPSPSC 240
D K V FDL +E+F+ +P P C
Sbjct: 257 VPDRKFVSFDLEDEEFKEIPKPDC 280
>AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWARD
LENGTH=427 | 201606
Length = 427
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 180/429 (41%), Gaps = 94/429 (21%)
Query: 4 LHPNIVEEIVSRVPPESIVQAKLVCKTW--------------ESVLRNKKYGILMSFGKE 49
L P I+ EI+ R+P +SI + + V K + + +LRN+ + S ++
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNES---VRSLHRK 92
Query: 50 YDEETSVELYYGDFD-------DIINYNDNRPLYSRPMV--KIDHPPIGKREFRD----- 95
+S LY DF+ D+ N PL P + ++ +G + D
Sbjct: 93 L-IVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVML 151
Query: 96 ------------TILGSCNGLVCFSIPHQNILDPVHICNPFTGEYFNLP---RLHGIE-R 139
I+GS NGLVC S P + V + NP TG+ LP R +E
Sbjct: 152 KLNAKSYRRNWVEIVGSSNGLVCIS-PGEG---AVFLYNPTTGDSKRLPENFRPKSVEYE 207
Query: 140 YSSFVARGFGYLQSTNEYKVLRIYYPKRESKPPEGFVQVYTLGDGRGWRNIEGTINYMLT 199
+F GFG+ T++YK++++ + VY+L WR I +NY
Sbjct: 208 RDNFQTYGFGFDGLTDDYKLVKLVATSEDILD----ASVYSL-KADSWRRI-CNLNYEHN 261
Query: 200 E--YMSGGTFGPNGAINFMTKDYK-----IVGFDLREEKFRVLPSP----SCFHEVGEYE 248
+ Y SG F NGAI+++ + + +V FD++ E+FR +P P C H +
Sbjct: 262 DGSYTSGVHF--NGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSH---RFS 316
Query: 249 AFSLRVLGGDLCFIHSRLPSSIHSRCVDKKKPKFLDIWSFKQKEGCWNWSK-DLRILSRK 307
F + L G LC ++S C D DIW + +WS+ + +L R
Sbjct: 317 NFVVGSLNGRLCVVNS---------CYDVHD----DIWVMSEYGEAKSWSRIRINLLYRS 363
Query: 308 DEWPMYDPFFITKKHEVVLWEINAGFVSYDPKTKTSKTI-VEKTNEVEHFEAILHMNTNI 366
P TK E VL E++ V Y+ +T S + + + FEA ++ + I
Sbjct: 364 -----MKPLCSTKNDEEVLLELDGDLVLYNFETNASSNLGICGVKLSDGFEANTYVESLI 418
Query: 367 SLRDMGVRS 375
S G+ S
Sbjct: 419 SPNSYGIES 427
>AT5G65850.1 | F-box and associated interaction domains-containing
protein | Chr5:26346317-26347495 FORWARD LENGTH=392 |
201606
Length = 392
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 128/308 (41%), Gaps = 43/308 (13%)
Query: 7 NIVEEIVSRVPPESIVQAKLVCKTWESVLRNKKYGILMSFGKEYDEETSVELYYGDFDDI 66
+I+ EI+ R+P +SI + V K W SV+ + + L + L+
Sbjct: 38 DIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELF---------LTRSLHRPQLLFC 88
Query: 67 INYNDNRPLYSRPMVKI---DHPPIGKREFRDT--ILGSCNGLVCFSIPHQNILDPVHIC 121
+ N +S P ++ + I + F I NGL+CF N V IC
Sbjct: 89 CKKDGNLFFFSSPQLQNPYENSSAISLKNFSLCYKISRPVNGLICFKRKEMNETVTV-IC 147
Query: 122 NPFTGEYFNLPRLHGIERYSSFVARGFGYLQSTNEYKVLRIYYPKRESKPPEGFVQVYTL 181
NP TG +LP+ + S +R F Y ++KVL Y QV TL
Sbjct: 148 NPSTGHTLSLPKPM---KTSIGPSRFFVYEPIQKQFKVLLSYKSDEH--------QVLTL 196
Query: 182 GDGR-GWRNIEGTINYMLTE---YMSGGTFGPNGAINFMTKDYKIVGFDLREEKFRVLPS 237
G G WR IE ++ ++L ++G + P AIN + DY IV FD+R EKFR
Sbjct: 197 GTGELSWRIIECSMPHILGMSEICINGVLYYP--AINLSSGDYIIVCFDVRSEKFRF--- 251
Query: 238 PSCFHEVGEYEAFSLRVLGGDLCFIHSRLPSSIHSR-CVDKKKPKFLDIWSFKQKEGCWN 296
+ E F G L + +L S + R C + K +++W + E
Sbjct: 252 ------ITVMEEFIKAAHDGTLINYNGKLASLVSERYCFVDGRSKSIELWVLQDAEK-KE 304
Query: 297 WSKDLRIL 304
WSK +L
Sbjct: 305 WSKHTYVL 312
>AT1G53550.1 | F-box family protein | Chr1:19983411-19984637 FORWARD
LENGTH=408 | 201606
Length = 408
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 7 NIVEEIVSRVPPESIVQAKLVCKTWESVLRNKKYGILMSFGKE------YDEETSVELYY 60
++V I+SR+ E I + + V K W S++R Y L + + + EL++
Sbjct: 38 DLVINILSRLSLECIARCRCVSKLWSSIIRRPNYNQLFPVKSSATPRLLFVFKVARELFF 97
Query: 61 GDFDDIINYNDNRPLYSRPMVKIDHPPIGKREFRDTILGSCNGLVCFSIPHQNILDPVHI 120
N N N L + + K + + +GL+C +N L + I
Sbjct: 98 NSSPQHFNPN-NSSLVATSLQKTSSTRFSQ------LCRPVHGLICSQHIEENYLFAL-I 149
Query: 121 CNPFTGEYFNLPRLHGIERYSSFVAR----GFGYLQSTNEYKVLRIYYPKRESKPPEGFV 176
NP TGEY LP+ E S + FGY ++KVLRI + R S
Sbjct: 150 SNPTTGEYIALPKQRMEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWSSEY 209
Query: 177 QVYTLGDGR-GWRNIEGTINYMLTE----YMSGGTFGPNGAINFMTKDYKIVGFDLREEK 231
QV TLG G WRN + + + L E ++G + P N + Y IV FD+ EK
Sbjct: 210 QVLTLGFGNISWRNTQCCVVHYLLEDSGICINGVLYYPARLDN---RKYTIVCFDVMTEK 266
Query: 232 F 232
F
Sbjct: 267 F 267
>AT3G23880.1 | F-box and associated interaction domains-containing
protein | Chr3:8622061-8623155 REVERSE LENGTH=364 |
201606
Length = 364
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 149/351 (42%), Gaps = 58/351 (16%)
Query: 8 IVEEIVSRVPPESIVQAKLVCKTWESVLRNKKYGILMSFGKEYDEE-TSVELYYGDFDDI 66
++EEI+ R+P +S+ + K VC +W S++ + + + E + TS + YG
Sbjct: 18 MMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGVITTS 77
Query: 67 ---INYNDNRPLYSRPMVKI---DHPPIGKREFRDTILGSCNGLVCFSIPHQNILDPVHI 120
+ LY+ V + D +G+ ++ ++G+C+GLVCF + + L
Sbjct: 78 RYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQ--VVGTCHGLVCFHVDYDKSL----- 130
Query: 121 CNPFTGEYFNLPRLHGIERYSS----------FVARGFGYLQSTNEYKVLRIYYPKRESK 170
Y P + +R SS V GFGY +S ++YKV+ + + + K
Sbjct: 131 -------YLWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDYKVVALLQQRHQVK 183
Query: 171 PPEGFVQVYTLGDGRGWRNIEGTINYMLTEYMSGGTFGPNGAIN----FMTKDYKIVGFD 226
++Y+ + WR+ + ++ S NG +N + + I+ +D
Sbjct: 184 IE---TKIYSTRQ-KLWRSNTSFPSGVVVADKSRSGIYINGTLNWAATSSSSSWTIISYD 239
Query: 227 LREEKFRVLPSPSCFHEVGEYEAFSLRVLGGDLCFIHSRLPSSIHSRCVDKKKPKFLDIW 286
+ ++F+ LP P C F++ + GDL R S+ C K D+W
Sbjct: 240 MSRDEFKELPGPVCCGR----GCFTMTL--GDL-----RGCLSMVCYC----KGANADVW 284
Query: 287 SFKQKEGCWNWSKDLRILSRKDEWPMYDPFFITKKHEVVLWEINAGFVSYD 337
K+ ++WSK L I D P +I+ VVL E +G Y+
Sbjct: 285 VMKEFGEVYSWSKLLSIPGLTD---FVRPLWISDGL-VVLLEFRSGLALYN 331