BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1870.1
(203 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07800.1 | Thymidine kinase | Chr3:2489944-2490935 REVERSE LE... 132 4e-38
AT5G23070.1 | Thymidine kinase | Chr5:7741979-7742827 FORWARD LE... 124 1e-34
AT1G53040.5 | tRNA (met) cytidine acetyltransferase%2C putative ... 75 1e-15
AT1G53040.4 | tRNA (met) cytidine acetyltransferase%2C putative ... 74 3e-15
AT1G53040.3 | tRNA (met) cytidine acetyltransferase%2C putative ... 74 3e-15
>AT3G07800.1 | Thymidine kinase | Chr3:2489944-2490935 REVERSE
LENGTH=238 | 201606
Length = 238
Score = 132 bits (331), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 78/105 (74%)
Query: 89 SVVILSSLSLEAPSKRNVVLIKSNEDTRFRLESVVTHDGARLPCWALPDLSSFGQKLGVD 148
S +L + E R+V ++KS++DTR+ +SVVTHDG PCWALPDL SF +K G+D
Sbjct: 45 STSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLD 104
Query: 149 AYDKVNVIRIDEAQFFEYLYDFFSKAADHDGKAVIVAGLDGDYLR 193
AY+K++VI IDEAQFF LY+F K AD DGK VIVAGLDGDYLR
Sbjct: 105 AYNKLDVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLR 149
>AT5G23070.1 | Thymidine kinase | Chr5:7741979-7742827 FORWARD
LENGTH=282 | 201606
Length = 282
Score = 124 bits (311), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 89 SVVILSSLSLEAPSKRNVVLIKSNEDTRFRLESVVTHDGARLPCWALPDLSSFGQKLGVD 148
+ +L + E + + + +IKSN+DTR+ ES+VTHDG + PCW+LPDLSSF ++ G D
Sbjct: 91 TTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFD 150
Query: 149 AYD-KVNVIRIDEAQFFEYLYDFFSKAADHDGKAVIVAGLDGDYLR 193
Y+ +++VI IDEAQFF LY+F +AAD +GK VIVAGLDGD++R
Sbjct: 151 DYENRLDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGLDGDFMR 196
>AT1G53040.5 | tRNA (met) cytidine acetyltransferase%2C putative
(DUF616) | Chr1:19765052-19766870 REVERSE LENGTH=434 |
201606
Length = 434
Score = 74.7 bits (182), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 21 RFLWQTNATISISDHDRRFDVFMEAKTKKAAAKY--TSTDFQVEVQNNAGLTHYSEAKLL 78
RFLW+TN++ +IS H RRFDVF+EA+ KAA KY S D+QVE GLT Y+EAKL
Sbjct: 350 RFLWRTNSSFAISRHYRRFDVFVEAEANKAARKYDNASIDYQVEFYKKEGLTPYTEAKLP 409
Query: 79 DTSGSS 84
TSG+
Sbjct: 410 ITSGNG 415
>AT1G53040.4 | tRNA (met) cytidine acetyltransferase%2C putative
(DUF616) | Chr1:19764791-19766870 REVERSE LENGTH=491 |
201606
Length = 491
Score = 73.9 bits (180), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 21 RFLWQTNATISISDHDRRFDVFMEAKTKKAAAKY--TSTDFQVEVQNNAGLTHYSEAKLL 78
RFLW+TN++ +IS H RRFDVF+EA+ KAA KY S D+QVE GLT Y+EAKL
Sbjct: 350 RFLWRTNSSFAISRHYRRFDVFVEAEANKAARKYDNASIDYQVEFYKKEGLTPYTEAKLP 409
Query: 79 DTSGSSRRCSSV 90
TS C+ +
Sbjct: 410 ITSDVPEGCTII 421
>AT1G53040.3 | tRNA (met) cytidine acetyltransferase%2C putative
(DUF616) | Chr1:19764791-19766870 REVERSE LENGTH=491 |
201606
Length = 491
Score = 73.9 bits (180), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 21 RFLWQTNATISISDHDRRFDVFMEAKTKKAAAKY--TSTDFQVEVQNNAGLTHYSEAKLL 78
RFLW+TN++ +IS H RRFDVF+EA+ KAA KY S D+QVE GLT Y+EAKL
Sbjct: 350 RFLWRTNSSFAISRHYRRFDVFVEAEANKAARKYDNASIDYQVEFYKKEGLTPYTEAKLP 409
Query: 79 DTSGSSRRCSSV 90
TS C+ +
Sbjct: 410 ITSDVPEGCTII 421