BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1920.1
(386 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32910.1 | DCD (Development and Cell Death) domain protein | ... 158 1e-42
AT5G61910.2 | DCD (Development and Cell Death) domain protein | ... 149 2e-39
AT5G61910.1 | DCD (Development and Cell Death) domain protein | ... 149 2e-39
AT5G61910.3 | DCD (Development and Cell Death) domain protein | ... 149 2e-39
AT5G61910.5 | DCD (Development and Cell Death) domain protein | ... 149 2e-39
>AT2G32910.1 | DCD (Development and Cell Death) domain protein |
Chr2:13959685-13961989 FORWARD LENGTH=691 | 201606
Length = 691
Score = 158 bits (400), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 1 MCNGKTKPECYKYRVFGLPAGKMSFVETIKPGVKLFLFDFDLKLLYGVYKATSKGEHGLE 60
MCN KT+P+C+++ V G+ + FV+ IKPG+KLFL+D+DLKLLYG+++A+S G LE
Sbjct: 325 MCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIFEASSAGGMKLE 384
Query: 61 PNAFGGRFPAQVRFKIFKDCVPIPESVFRHVIEGNYEGGSKFQPQLSNRQVRKLSALFRP 120
NAFGG FPAQVRFK+F DC+P+ ES F+ I NY +KF+ +L+++QV KL LFRP
Sbjct: 385 RNAFGGSFPAQVRFKVFSDCIPLAESQFKKAIIENYNNKNKFKTELTHKQVFKLKKLFRP 444
Query: 121 LGV---TPHATVAPSPQHA----PVRDRY 142
+ H P P+ RDRY
Sbjct: 445 AAIPAQVTHTQQIPVPRDTDRKRSDRDRY 473
>AT5G61910.2 | DCD (Development and Cell Death) domain protein |
Chr5:24861091-24863729 REVERSE LENGTH=738 | 201606
Length = 738
Score = 149 bits (377), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 1 MCNGKTKPECYKYRVFGLPAGKMSFVETIKPGVKLFLFDFDLKLLYGVYKATSKGEHGLE 60
MCNG+TK +CY+YRVFG+P G VE+IKPG+KLFL+DF+ +LLYGVY+AT G +E
Sbjct: 67 MCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGRLDIE 126
Query: 61 PNAFGGRFPAQVRFKIFKDCVPIPESVFRHVIEGNYEGGSKFQPQLSNRQVRKLSALFRP 120
P AF G++PAQV F+I +C+P+ E+ F+ I NY+ GSKF+ +LS QV L +LFR
Sbjct: 127 PEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYK-GSKFKQELSPHQVMSLLSLFRS 185
Query: 121 -----LGVTPH--ATVAPSPQHAPVRDRY 142
L + PH A+ A +P+ +R+
Sbjct: 186 FTSPELDLLPHRLASRASAPRTLSFEERF 214
>AT5G61910.1 | DCD (Development and Cell Death) domain protein |
Chr5:24861091-24863729 REVERSE LENGTH=738 | 201606
Length = 738
Score = 149 bits (377), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 1 MCNGKTKPECYKYRVFGLPAGKMSFVETIKPGVKLFLFDFDLKLLYGVYKATSKGEHGLE 60
MCNG+TK +CY+YRVFG+P G VE+IKPG+KLFL+DF+ +LLYGVY+AT G +E
Sbjct: 67 MCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGRLDIE 126
Query: 61 PNAFGGRFPAQVRFKIFKDCVPIPESVFRHVIEGNYEGGSKFQPQLSNRQVRKLSALFRP 120
P AF G++PAQV F+I +C+P+ E+ F+ I NY+ GSKF+ +LS QV L +LFR
Sbjct: 127 PEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYK-GSKFKQELSPHQVMSLLSLFRS 185
Query: 121 -----LGVTPH--ATVAPSPQHAPVRDRY 142
L + PH A+ A +P+ +R+
Sbjct: 186 FTSPELDLLPHRLASRASAPRTLSFEERF 214
>AT5G61910.3 | DCD (Development and Cell Death) domain protein |
Chr5:24861091-24863741 REVERSE LENGTH=742 | 201606
Length = 742
Score = 149 bits (377), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 1 MCNGKTKPECYKYRVFGLPAGKMSFVETIKPGVKLFLFDFDLKLLYGVYKATSKGEHGLE 60
MCNG+TK +CY+YRVFG+P G VE+IKPG+KLFL+DF+ +LLYGVY+AT G +E
Sbjct: 71 MCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGRLDIE 130
Query: 61 PNAFGGRFPAQVRFKIFKDCVPIPESVFRHVIEGNYEGGSKFQPQLSNRQVRKLSALFRP 120
P AF G++PAQV F+I +C+P+ E+ F+ I NY+ GSKF+ +LS QV L +LFR
Sbjct: 131 PEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYK-GSKFKQELSPHQVMSLLSLFRS 189
Query: 121 -----LGVTPH--ATVAPSPQHAPVRDRY 142
L + PH A+ A +P+ +R+
Sbjct: 190 FTSPELDLLPHRLASRASAPRTLSFEERF 218
>AT5G61910.5 | DCD (Development and Cell Death) domain protein |
Chr5:24861091-24863729 REVERSE LENGTH=706 | 201606
Length = 706
Score = 149 bits (377), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 102/149 (68%), Gaps = 8/149 (5%)
Query: 1 MCNGKTKPECYKYRVFGLPAGKMSFVETIKPGVKLFLFDFDLKLLYGVYKATSKGEHGLE 60
MCNG+TK +CY+YRVFG+P G VE+IKPG+KLFL+DF+ +LLYGVY+AT G +E
Sbjct: 67 MCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGRLDIE 126
Query: 61 PNAFGGRFPAQVRFKIFKDCVPIPESVFRHVIEGNYEGGSKFQPQLSNRQVRKLSALFRP 120
P AF G++PAQV F+I +C+P+ E+ F+ I NY+ GSKF+ +LS QV L +LFR
Sbjct: 127 PEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYK-GSKFKQELSPHQVMSLLSLFRS 185
Query: 121 -----LGVTPH--ATVAPSPQHAPVRDRY 142
L + PH A+ A +P+ +R+
Sbjct: 186 FTSPELDLLPHRLASRASAPRTLSFEERF 214