BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1950.1
(440 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G29880.1 | glycyl-tRNA synthetase / glycine-tRNA ligase | Chr... 756 0.0
AT1G29870.1 | tRNA synthetase class II (G%2C H%2C P and S) famil... 362 e-122
AT3G44740.5 | Class II aaRS and biotin synthetases superfamily p... 248 3e-80
AT3G44740.4 | Class II aaRS and biotin synthetases superfamily p... 248 3e-80
AT3G44740.3 | Class II aaRS and biotin synthetases superfamily p... 248 3e-80
>AT1G29880.1 | glycyl-tRNA synthetase / glycine-tRNA ligase |
Chr1:10459662-10462781 REVERSE LENGTH=729 | 201606
Length = 729
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/437 (84%), Positives = 398/437 (91%)
Query: 1 MRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFV 60
MRPETAQGIFVNFKDLYYYNG KLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFV
Sbjct: 293 MRPETAQGIFVNFKDLYYYNGKKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFV 352
Query: 61 DPDDKSHPKYGDVADLEFLMFPREEQMTGQEAKRLLLGDAVSKGIVNNQTLAYFIGRVYL 120
DP++KSHPK+ DVA LEFLMFPREEQM+GQ AK+L LG+AV+KG VNN+TL YFIGRVYL
Sbjct: 353 DPENKSHPKFSDVAKLEFLMFPREEQMSGQSAKKLCLGEAVAKGTVNNETLGYFIGRVYL 412
Query: 121 FLTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSDK 180
FLTRLGIDK+RLRFRQHLANEMAHYAADCWDAEIE SYGWIECVGIADRSAYDLRAHSDK
Sbjct: 413 FLTRLGIDKERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSDK 472
Query: 181 SGVPLVAHEKFTEPREVEKLVIAPVKKELGLAFKGNQKMVVEALEAMNEKEAMEMKATLE 240
SG PLVA EKF EP+EVEKLVI PVKKELGLAFKGNQK VVE+LEAMNE+EAMEMKATLE
Sbjct: 473 SGTPLVAEEKFAEPKEVEKLVITPVKKELGLAFKGNQKNVVESLEAMNEEEAMEMKATLE 532
Query: 241 SKGEVEFQVCTLGKAVTIKSSMVSISKEIKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSF 300
SKGEVEF VCTL K+V IK +MVSISKE KKEHQRVFTPSVIEPSFGIGRIIYCL+EH F
Sbjct: 533 SKGEVEFYVCTLKKSVNIKKNMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHCF 592
Query: 301 YTRPSKAGDEQLNVFSFPPLVAPIKCTVFPLVQNQQYEEVAKQISKSLTAAGISHKIDIT 360
TRPSKAGDEQLN+F FPPLVAPIKCTVFPLVQNQQ+EEVAK ISK L + GISHKIDIT
Sbjct: 593 STRPSKAGDEQLNLFRFPPLVAPIKCTVFPLVQNQQFEEVAKVISKELASVGISHKIDIT 652
Query: 361 GTSIGKRYARTDELGVPFAITVDSTTDVTIRERDGKNQIRVPIEEVASVVKDVTDGQSTW 420
GTSIGKRYARTDELGVPFAITVDS T VTIRERD K+Q+RV ++E ASVV V++G+ TW
Sbjct: 653 GTSIGKRYARTDELGVPFAITVDSDTSVTIRERDSKDQVRVTLKEAASVVSSVSEGKMTW 712
Query: 421 ADVQWRYPTHSSLSADE 437
DV +P HSS +ADE
Sbjct: 713 QDVWATFPHHSSAAADE 729
>AT1G29870.1 | tRNA synthetase class II (G%2C H%2C P and S) family
protein | Chr1:10456902-10458782 REVERSE LENGTH=463 |
201606
Length = 463
Score = 362 bits (930), Expect = e-122, Method: Compositional matrix adjust.
Identities = 176/226 (77%), Positives = 188/226 (83%), Gaps = 1/226 (0%)
Query: 1 MRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFV 60
+RPETAQG F NFKD Y NG KLPFA AQ+G+ FRNEISPRQGLLR REFTLAEIEHFV
Sbjct: 236 LRPETAQGSFCNFKDYYNLNGRKLPFAVAQVGRVFRNEISPRQGLLRTREFTLAEIEHFV 295
Query: 61 DPDDKSHPKYGDVADLEFLMFPREEQ-MTGQEAKRLLLGDAVSKGIVNNQTLAYFIGRVY 119
P+ KSH K+ DVA LE LMFPREEQ GQ AKRL LG+AV+KG VN++TL +FIGRVY
Sbjct: 296 HPEHKSHSKFSDVAKLELLMFPREEQEKPGQFAKRLCLGEAVAKGHVNSETLGFFIGRVY 355
Query: 120 LFLTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSD 179
LFL RLGIDK+RLRFR HLANEMAHYA DCWDAEIECSYGWIECVGIADRS YDLRAHS+
Sbjct: 356 LFLIRLGIDKERLRFRHHLANEMAHYATDCWDAEIECSYGWIECVGIADRSDYDLRAHSE 415
Query: 180 KSGVPLVAHEKFTEPREVEKLVIAPVKKELGLAFKGNQKMVVEALE 225
KSG LVA EK EP EVEKL I P KELG AFKGNQK VVEALE
Sbjct: 416 KSGHALVAQEKLAEPIEVEKLAITPEMKELGPAFKGNQKNVVEALE 461
>AT3G44740.5 | Class II aaRS and biotin synthetases superfamily
protein | Chr3:16296410-16297687 REVERSE LENGTH=244 |
201606
Length = 244
Score = 248 bits (634), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 3 PETAQGIFVNFKD-LYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVD 61
P+T + +F + L ++ FRNEIS RQGLLRV EFTLAEIEHFVD
Sbjct: 54 PDTKNTLTRHFCEGLVLLQWEEISLCCCSNWSTFRNEISHRQGLLRVCEFTLAEIEHFVD 113
Query: 62 PDDKSHPKYGDVADLEFLMFPREEQMTGQEAKRLLLGDAVSKGIVNNQTLAYFIGRVYLF 121
P +KSHPK+ DVA+ EFLMFPREEQM+GQ AK+L LG+ V+KG VN +T+ YFI RVYLF
Sbjct: 114 PGNKSHPKFSDVANFEFLMFPREEQMSGQSAKKLCLGEVVAKGTVNKETVGYFIARVYLF 173
Query: 122 LTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHS 178
L RLG DK++LRFRQH ANEMA YAADC DAE E SYGWIECVGIADRSA+DLRAHS
Sbjct: 174 LVRLGTDKEQLRFRQHFANEMARYAADCLDAEFESSYGWIECVGIADRSAFDLRAHS 230
>AT3G44740.4 | Class II aaRS and biotin synthetases superfamily
protein | Chr3:16296410-16297687 REVERSE LENGTH=244 |
201606
Length = 244
Score = 248 bits (634), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 3 PETAQGIFVNFKD-LYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVD 61
P+T + +F + L ++ FRNEIS RQGLLRV EFTLAEIEHFVD
Sbjct: 54 PDTKNTLTRHFCEGLVLLQWEEISLCCCSNWSTFRNEISHRQGLLRVCEFTLAEIEHFVD 113
Query: 62 PDDKSHPKYGDVADLEFLMFPREEQMTGQEAKRLLLGDAVSKGIVNNQTLAYFIGRVYLF 121
P +KSHPK+ DVA+ EFLMFPREEQM+GQ AK+L LG+ V+KG VN +T+ YFI RVYLF
Sbjct: 114 PGNKSHPKFSDVANFEFLMFPREEQMSGQSAKKLCLGEVVAKGTVNKETVGYFIARVYLF 173
Query: 122 LTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHS 178
L RLG DK++LRFRQH ANEMA YAADC DAE E SYGWIECVGIADRSA+DLRAHS
Sbjct: 174 LVRLGTDKEQLRFRQHFANEMARYAADCLDAEFESSYGWIECVGIADRSAFDLRAHS 230
>AT3G44740.3 | Class II aaRS and biotin synthetases superfamily
protein | Chr3:16296410-16297687 REVERSE LENGTH=244 |
201606
Length = 244
Score = 248 bits (634), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 3 PETAQGIFVNFKD-LYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVD 61
P+T + +F + L ++ FRNEIS RQGLLRV EFTLAEIEHFVD
Sbjct: 54 PDTKNTLTRHFCEGLVLLQWEEISLCCCSNWSTFRNEISHRQGLLRVCEFTLAEIEHFVD 113
Query: 62 PDDKSHPKYGDVADLEFLMFPREEQMTGQEAKRLLLGDAVSKGIVNNQTLAYFIGRVYLF 121
P +KSHPK+ DVA+ EFLMFPREEQM+GQ AK+L LG+ V+KG VN +T+ YFI RVYLF
Sbjct: 114 PGNKSHPKFSDVANFEFLMFPREEQMSGQSAKKLCLGEVVAKGTVNKETVGYFIARVYLF 173
Query: 122 LTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHS 178
L RLG DK++LRFRQH ANEMA YAADC DAE E SYGWIECVGIADRSA+DLRAHS
Sbjct: 174 LVRLGTDKEQLRFRQHFANEMARYAADCLDAEFESSYGWIECVGIADRSAFDLRAHS 230