BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0040.1
(333 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 148 3e-39
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 148 3e-39
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 122 8e-33
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 51 7e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 148 bits (373), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 138/266 (51%), Gaps = 11/266 (4%)
Query: 4 IDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGMQNAKAV 63
+D+LKSQL F+++D+G K LG+EI R S+ + + Q+ Y ++ G+ K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 64 STPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSKFMA 123
S P+ P S D +D Y +G LMY + T DIS AV+ +S+F
Sbjct: 355 SVPMDPSVTFSAHS------GGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 124 NPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTIGYVFRV 182
P H +AV +L Y+KGTV GL + Q+ + D+ + D RRST GY +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 183 HGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALWLWGLLDDLGIK-QEHVDLWCDSQS 241
+ +SW+S Q V+ S+ E EY ++ E +WL +L + + L+CD+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 242 AIHLAKNQVHHARTKHIDVRYHFVRD 267
AIH+A N V H RTKHI+ H VR+
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 148 bits (373), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 138/266 (51%), Gaps = 11/266 (4%)
Query: 4 IDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGMQNAKAV 63
+D+LKSQL F+++D+G K LG+EI R S+ + + Q+ Y ++ G+ K
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPS 354
Query: 64 STPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSKFMA 123
S P+ P S D +D Y +G LMY + T DIS AV+ +S+F
Sbjct: 355 SVPMDPSVTFSAHS------GGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSE 407
Query: 124 NPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTIGYVFRV 182
P H +AV +L Y+KGTV GL + Q+ + D+ + D RRST GY +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 183 HGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALWLWGLLDDLGIK-QEHVDLWCDSQS 241
+ +SW+S Q V+ S+ E EY ++ E +WL +L + + L+CD+ +
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527
Query: 242 AIHLAKNQVHHARTKHIDVRYHFVRD 267
AIH+A N V H RTKHI+ H VR+
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 122 bits (306), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 11/216 (5%)
Query: 4 IDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGMQNAKAV 63
++ L QLS F MKD+G LG++IK S L+LSQ Y E++++ GM + K +
Sbjct: 20 LNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPM 77
Query: 64 STPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSKFMA 123
STPL K + + + AK + D + S VG+L Y + T PDIS AV++V + M
Sbjct: 78 STPLP------LKLNSSVSTAK-YPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMH 129
Query: 124 NPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSGYVDSDYAGDLDRRRSTIGYVFRV 182
P ++ +K VLRY+KGT+ GL ++ V + DSD+AG RRST G+ +
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189
Query: 183 HGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALW 218
+SW + Q TV+ S+TE EY +A E W
Sbjct: 190 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 50.8 bits (120), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 101 MYAMVCTCPDISQAVSVVSKFMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDT-CQVSG 159
MY + T PD++ AV+ +S+F + +AV VL Y+KGTV GL + + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 160 YVDSDYAGDLDRRRSTIGY 178
+ DSD+A D RRS G+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78