BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0060.1
(321 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 46 3e-05
AT4G35820.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenas... 45 4e-05
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 14/225 (6%)
Query: 21 KNNFSYWRMQMKNLLISQKLHKTLTGKK-PGDMSDEDWEELDLEARATIMLCLERDVA-F 78
K N+ WR + L +S + + G P M+++ W+E D + I + +
Sbjct: 30 KLNYDVWRELFETLCLSFGVLGHIDGSSTPTPMTEKRWKERDGLVKMWIYGTITDSLLDT 89
Query: 79 LVDGETTAASVWLKLENNFMTKTLTNRVYLKSKLFTCRMEEGSSIQEYVNSFDRIISDLK 138
++ TA +WL LEN F + +++L T +++ S+ EY + L
Sbjct: 90 IIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDD-LSVHEYCQKLKSLSDLLT 148
Query: 139 DIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSMEETRNSLLADDLRKVATNSMA 198
++D + D + LL L + Y+ ++ + S E R+ LL ++ R + +
Sbjct: 149 NVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESRLSNKSKSS 208
Query: 199 SGGVDKEQAQGLFVTRGRSTERGKD-----------GKSRSKSRG 232
+ + T R ER G+S+ K+RG
Sbjct: 209 LSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRGRSKKKNRG 253
>AT4G35820.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein | Chr4:16971221-16972429 FORWARD
LENGTH=272 | 201606
Length = 272
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 101 TLTNRVYLKSKLFTCRMEEGSSIQEYVNSFDRIISDLKDIDVKVEDEDQALILLLSLPKS 160
+++ +YL+ +L ++ E S + +++N+FD ++ + +DVK+E++ + +ILL SL
Sbjct: 6 SVSTILYLRQRLQGLKIYETSDLIQHINTFDELVGEQVSVDVKIEEKTKDMILLCSLSPL 65
Query: 161 YENLVQTLMLVGDSLSMEETR 181
L +++ V SL R
Sbjct: 66 LTTLTCSMVKVAASLRFPNER 86