BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0070.1
(190 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53330.1 | Ubiquitin-associated/translation elongation factor... 200 2e-65
>AT5G53330.1 | Ubiquitin-associated/translation elongation factor
EF1B protein | Chr5:21639236-21640716 FORWARD LENGTH=221
| 201606
Length = 221
Score = 200 bits (509), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 146/222 (65%), Gaps = 33/222 (14%)
Query: 1 MDYDYRTRAGPPYDAHIPMYRPTNTTHDSSSL-----YPRLGT----------------- 38
MDYDYR ++G P PMY P +T+ SS YP++G
Sbjct: 1 MDYDYRNKSGGPSYPR-PMYGPPSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPERNSS 59
Query: 39 -------SAGLGIRVTIKPEYRITPPPQLSSYVGEIPRSSFQFDFDFEKKILAEAEKGNQ 91
S+G+GIRV +KPEYRITPPPQL VG+I RSSFQFDF E+K+LAEAEK N
Sbjct: 60 FQHNTSPSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNP 119
Query: 92 NWSRFGSENPPPRSVE-STSSMG--AATDPVVTKYIASGLDREAVPIAVANFGDDPAKVR 148
+WS+FGSENPP + E S SS+G D VV KY ASGL+REAV IAVAN+GD+P KV+
Sbjct: 120 DWSKFGSENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQ 179
Query: 149 EFVNGYKTLRDMGFPSNSVTEALAMYDNDVDKAIVHFLNSST 190
EF NG+ +R+MGFP+N+V +AL M++ND DKA+ H L+ S+
Sbjct: 180 EFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221