BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0080.1
(221 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 3e-43
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 3e-43
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 100 8e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 61 4e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (392), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 2 QHPRSVHMDAATRVLRYLKAILNYGILLSSASTLTLSGFTDSDWASCPTSRRSTTGFFTM 61
+ PR H A ++L Y+K + G+ SS + + L F+D+ + SC +RRST G+
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 62 LGNSPLSWRSKKQPTVSRSSAEAAYRVLASLTAELQWLKYLFQDLRISIPEPIPIFCDNK 121
LG S +SW+SKKQ VS+SSAEA YR L+ T E+ WL F++L++ + +P +FCDN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 122 AAIHIAGNPVFHERTKHIEIDCHFVCEKVASCLIHTHYMRSADQVADIFTKPL 174
AAIHIA N VFHERTKHIE DCH V E+ ++ ++ D+ D FT+ L
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (392), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 2 QHPRSVHMDAATRVLRYLKAILNYGILLSSASTLTLSGFTDSDWASCPTSRRSTTGFFTM 61
+ PR H A ++L Y+K + G+ SS + + L F+D+ + SC +RRST G+
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 62 LGNSPLSWRSKKQPTVSRSSAEAAYRVLASLTAELQWLKYLFQDLRISIPEPIPIFCDNK 121
LG S +SW+SKKQ VS+SSAEA YR L+ T E+ WL F++L++ + +P +FCDN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 122 AAIHIAGNPVFHERTKHIEIDCHFVCEKVASCLIHTHYMRSADQVADIFTKPL 174
AAIHIA N VFHERTKHIE DCH V E+ ++ ++ D+ D FT+ L
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 100 bits (250), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (62%)
Query: 1 MQHPRSVHMDAATRVLRYLKAILNYGILLSSASTLTLSGFTDSDWASCPTSRRSTTGFFT 60
M P D RVLRY+K + +G+ + S L + F DSDWA C ++RRSTTGF T
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187
Query: 61 MLGNSPLSWRSKKQPTVSRSSAEAAYRVLASLTAELQW 98
LG + +SW +K+QPTVSRSS E YR LA AEL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 61.2 bits (147), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 5 RSVHMDAATRVLRYLKAILNYGILLSSASTLTLSGFTDSDWASCPTSRRSTTGFFTML 62
R+ M A +VL Y+K + G+ S+ S L L F DSDWASCP +RRS TGF +++
Sbjct: 25 RTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFCSLV 82