BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0140.1
(536 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04730.1 | P-loop containing nucleoside triphosphate hydrolas... 478 e-159
AT1G04730.4 | P-loop containing nucleoside triphosphate hydrolas... 405 e-134
AT1G04730.3 | P-loop containing nucleoside triphosphate hydrolas... 405 e-134
AT1G04730.2 | P-loop containing nucleoside triphosphate hydrolas... 405 e-134
AT5G22010.1 | replication factor C1 | Chr5:7280632-7287037 REVER... 52 1e-06
>AT1G04730.1 | P-loop containing nucleoside triphosphate hydrolases
superfamily protein | Chr1:1325385-1331086 REVERSE
LENGTH=943 | 201606
Length = 943
Score = 478 bits (1230), Expect = e-159, Method: Compositional matrix adjust.
Identities = 249/453 (54%), Positives = 327/453 (72%), Gaps = 19/453 (4%)
Query: 84 DLDDPSSDASFSSGLKRNRLEEPPIRPEGDEDEEEWLRYSRPPTPQPSVPVVEEQDQNQE 143
+LD+ S + S + NR+E ++E+WLR+S + EE QE
Sbjct: 81 NLDEVSPASDKRSKIDDNRVEI---------EDEDWLRFSPVKEVVHVMEEEEEVVIPQE 131
Query: 144 KFISRFASEVDGVCISVTGPSGC-RVYAKVTKMMNNTSLHNKSITSKSFPSKGLISEPVS 202
+SR+ASE+DG C +T P G RVYAK + + + ++ + KS GLI +P+S
Sbjct: 132 TMLSRYASEIDGECFPITAPDGGDRVYAKFCRALGDEEVNKLDVKDKS---NGLIKDPIS 188
Query: 203 VLMKRWEEDASIKALQVSSESSDAFVSHQSSVVTENLWVDKYSPKSFTELLSDEQTNREI 262
VL+++ E++A K LQ SSE + +S ++SV+ E LWVDKYSP SFTELLSDEQTNRE+
Sbjct: 189 VLLQQSEKEAFNKVLQASSEDQNETISAETSVMHEKLWVDKYSPSSFTELLSDEQTNREV 248
Query: 263 LLWLKQWDTCVFGSEIRSTSTDVLSSLRRHTSLAQHQKLSHITSFGKTGK-TSFTSSAFK 321
LLWLKQWD VFGSEIRST+ VLS+L+RH++ + HQK ++F + + ++ +F
Sbjct: 249 LLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTSHHQKSD--SAFTRKKQFNRWSKESFG 306
Query: 322 HSDSFNREHNNVKEIHESGNKKSMSTGPPDHKVLLLCGPPGLGKTTLAHVAAKHCGYRVV 381
+S + + N +I++ NKKS TGPP+ K+LLLCG PGLGKTTLAH+AAKHCGYRVV
Sbjct: 307 YSKNAEVSNTNTADINDLWNKKSKLTGPPEQKILLLCGAPGLGKTTLAHIAAKHCGYRVV 366
Query: 382 EINASDDRSSSTIEAKILDVVQMNSVMADAKPKCLIIDEIDGALGEGKGAVEVILKMLAA 441
EINASD+RS+S IE +ILDVVQMNSV AD++PKCL+IDEIDGALG+GKGAV+VILKM+ A
Sbjct: 367 EINASDERSASAIETRILDVVQMNSVTADSRPKCLVIDEIDGALGDGKGAVDVILKMVLA 426
Query: 442 EKKSEFGKENFAQKEQGKFSSKRGRKTATLSRPVICICNNLFAPSLRPLRQVAKVHMFVK 501
E+K GKEN E K SSK+ R+TA LSRPVICICN+L+AP+LRPLRQ+AKVH+FV+
Sbjct: 427 ERKHATGKENV---ENVKTSSKKDRRTAPLSRPVICICNDLYAPALRPLRQIAKVHIFVQ 483
Query: 502 PSVSRVVNRLKFICNKEGFRASSVALTALAAHT 534
P+VSRVVNRLK+ICN EG +A S AL+ALA +T
Sbjct: 484 PTVSRVVNRLKYICNMEGMKARSFALSALAEYT 516
>AT1G04730.4 | P-loop containing nucleoside triphosphate hydrolases
superfamily protein | Chr1:1325385-1330227 REVERSE
LENGTH=723 | 201606
Length = 723
Score = 405 bits (1042), Expect = e-134, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 243/299 (81%), Gaps = 6/299 (2%)
Query: 237 ENLWVDKYSPKSFTELLSDEQTNREILLWLKQWDTCVFGSEIRSTSTDVLSSLRRHTSLA 296
E LWVDKYSP SFTELLSDEQTNRE+LLWLKQWD VFGSEIRST+ VLS+L+RH++ +
Sbjct: 3 EKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTS 62
Query: 297 QHQKLSHITSFGKTGK-TSFTSSAFKHSDSFNREHNNVKEIHESGNKKSMSTGPPDHKVL 355
HQK ++F + + ++ +F +S + + N +I++ NKKS TGPP+ K+L
Sbjct: 63 HHQKSD--SAFTRKKQFNRWSKESFGYSKNAEVSNTNTADINDLWNKKSKLTGPPEQKIL 120
Query: 356 LLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADAKPKC 415
LLCG PGLGKTTLAH+AAKHCGYRVVEINASD+RS+S IE +ILDVVQMNSV AD++PKC
Sbjct: 121 LLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPKC 180
Query: 416 LIIDEIDGALGEGKGAVEVILKMLAAEKKSEFGKENFAQKEQGKFSSKRGRKTATLSRPV 475
L+IDEIDGALG+GKGAV+VILKM+ AE+K GKEN E K SSK+ R+TA LSRPV
Sbjct: 181 LVIDEIDGALGDGKGAVDVILKMVLAERKHATGKENV---ENVKTSSKKDRRTAPLSRPV 237
Query: 476 ICICNNLFAPSLRPLRQVAKVHMFVKPSVSRVVNRLKFICNKEGFRASSVALTALAAHT 534
ICICN+L+AP+LRPLRQ+AKVH+FV+P+VSRVVNRLK+ICN EG +A S AL+ALA +T
Sbjct: 238 ICICNDLYAPALRPLRQIAKVHIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEYT 296
>AT1G04730.3 | P-loop containing nucleoside triphosphate hydrolases
superfamily protein | Chr1:1325385-1330227 REVERSE
LENGTH=723 | 201606
Length = 723
Score = 405 bits (1042), Expect = e-134, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 243/299 (81%), Gaps = 6/299 (2%)
Query: 237 ENLWVDKYSPKSFTELLSDEQTNREILLWLKQWDTCVFGSEIRSTSTDVLSSLRRHTSLA 296
E LWVDKYSP SFTELLSDEQTNRE+LLWLKQWD VFGSEIRST+ VLS+L+RH++ +
Sbjct: 3 EKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTS 62
Query: 297 QHQKLSHITSFGKTGK-TSFTSSAFKHSDSFNREHNNVKEIHESGNKKSMSTGPPDHKVL 355
HQK ++F + + ++ +F +S + + N +I++ NKKS TGPP+ K+L
Sbjct: 63 HHQKSD--SAFTRKKQFNRWSKESFGYSKNAEVSNTNTADINDLWNKKSKLTGPPEQKIL 120
Query: 356 LLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADAKPKC 415
LLCG PGLGKTTLAH+AAKHCGYRVVEINASD+RS+S IE +ILDVVQMNSV AD++PKC
Sbjct: 121 LLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPKC 180
Query: 416 LIIDEIDGALGEGKGAVEVILKMLAAEKKSEFGKENFAQKEQGKFSSKRGRKTATLSRPV 475
L+IDEIDGALG+GKGAV+VILKM+ AE+K GKEN E K SSK+ R+TA LSRPV
Sbjct: 181 LVIDEIDGALGDGKGAVDVILKMVLAERKHATGKENV---ENVKTSSKKDRRTAPLSRPV 237
Query: 476 ICICNNLFAPSLRPLRQVAKVHMFVKPSVSRVVNRLKFICNKEGFRASSVALTALAAHT 534
ICICN+L+AP+LRPLRQ+AKVH+FV+P+VSRVVNRLK+ICN EG +A S AL+ALA +T
Sbjct: 238 ICICNDLYAPALRPLRQIAKVHIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEYT 296
>AT1G04730.2 | P-loop containing nucleoside triphosphate hydrolases
superfamily protein | Chr1:1325385-1330227 REVERSE
LENGTH=723 | 201606
Length = 723
Score = 405 bits (1042), Expect = e-134, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 243/299 (81%), Gaps = 6/299 (2%)
Query: 237 ENLWVDKYSPKSFTELLSDEQTNREILLWLKQWDTCVFGSEIRSTSTDVLSSLRRHTSLA 296
E LWVDKYSP SFTELLSDEQTNRE+LLWLKQWD VFGSEIRST+ VLS+L+RH++ +
Sbjct: 3 EKLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTS 62
Query: 297 QHQKLSHITSFGKTGK-TSFTSSAFKHSDSFNREHNNVKEIHESGNKKSMSTGPPDHKVL 355
HQK ++F + + ++ +F +S + + N +I++ NKKS TGPP+ K+L
Sbjct: 63 HHQKSD--SAFTRKKQFNRWSKESFGYSKNAEVSNTNTADINDLWNKKSKLTGPPEQKIL 120
Query: 356 LLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADAKPKC 415
LLCG PGLGKTTLAH+AAKHCGYRVVEINASD+RS+S IE +ILDVVQMNSV AD++PKC
Sbjct: 121 LLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPKC 180
Query: 416 LIIDEIDGALGEGKGAVEVILKMLAAEKKSEFGKENFAQKEQGKFSSKRGRKTATLSRPV 475
L+IDEIDGALG+GKGAV+VILKM+ AE+K GKEN E K SSK+ R+TA LSRPV
Sbjct: 181 LVIDEIDGALGDGKGAVDVILKMVLAERKHATGKENV---ENVKTSSKKDRRTAPLSRPV 237
Query: 476 ICICNNLFAPSLRPLRQVAKVHMFVKPSVSRVVNRLKFICNKEGFRASSVALTALAAHT 534
ICICN+L+AP+LRPLRQ+AKVH+FV+P+VSRVVNRLK+ICN EG +A S AL+ALA +T
Sbjct: 238 ICICNDLYAPALRPLRQIAKVHIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEYT 296
>AT5G22010.1 | replication factor C1 | Chr5:7280632-7287037 REVERSE
LENGTH=956 | 201606
Length = 956
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 46/195 (23%)
Query: 353 KVLLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDR--SSSTIEAKILDVVQMNSV--- 407
K +LL G PG+GKTT A + ++ G++ VE+NASD R ++S I AK + NSV
Sbjct: 394 KAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNI-AKGIGGSNANSVKEL 452
Query: 408 -----MA-----DAKPK-CLIIDEIDGALGEGKGAVEVILKMLAAEKKSEFGKENFAQKE 456
MA PK LI+DE+DG +G V ++ + K
Sbjct: 453 VNNEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPII--------- 503
Query: 457 QGKFSSKRGRKTATLSRPVICICNNLFAPSLRPLRQVAKVHMFVKPSVSRVVNRLKFICN 516
CICN+ ++ L+ L + KP+ ++ RL I
Sbjct: 504 --------------------CICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAK 543
Query: 517 KEGFRASSVALTALA 531
EG + +AL LA
Sbjct: 544 AEGLEINEIALEELA 558