BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0190.1
(144 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04520.1 | Nucleic acid-binding%2C OB-fold-like protein | Chr... 257 1e-89
AT5G35680.2 | Nucleic acid-binding%2C OB-fold-like protein | Chr... 241 3e-83
AT5G35680.1 | Nucleic acid-binding%2C OB-fold-like protein | Chr... 241 3e-83
AT5G35680.3 | Nucleic acid-binding%2C OB-fold-like protein | Chr... 235 5e-81
>AT2G04520.1 | Nucleic acid-binding%2C OB-fold-like protein |
Chr2:1574802-1575239 REVERSE LENGTH=145 | 201606
Length = 145
Score = 257 bits (656), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 131/145 (90%), Positives = 140/145 (96%), Gaps = 1/145 (0%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
Query: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIA 120
IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLNEGI
Sbjct: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120
Query: 121 G-VEEEEEGVDDNYIEFEDEDIDKI 144
G +E++++ DD+Y+EFEDEDID+I
Sbjct: 121 GDLEDDDDNNDDDYVEFEDEDIDRI 145
>AT5G35680.2 | Nucleic acid-binding%2C OB-fold-like protein |
Chr5:13858152-13858589 REVERSE LENGTH=145 | 201606
Length = 145
Score = 241 bits (614), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 123/145 (84%), Positives = 136/145 (93%), Gaps = 1/145 (0%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60
Query: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNE-GI 119
IRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLNE +
Sbjct: 61 IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120
Query: 120 AGVEEEEEGVDDNYIEFEDEDIDKI 144
++++++ V ++YIEFEDEDID+I
Sbjct: 121 GDLDDDDDVVGEDYIEFEDEDIDRI 145
>AT5G35680.1 | Nucleic acid-binding%2C OB-fold-like protein |
Chr5:13858152-13858589 REVERSE LENGTH=145 | 201606
Length = 145
Score = 241 bits (614), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 123/145 (84%), Positives = 136/145 (93%), Gaps = 1/145 (0%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60
Query: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNE-GI 119
IRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLNE +
Sbjct: 61 IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGIV 120
Query: 120 AGVEEEEEGVDDNYIEFEDEDIDKI 144
++++++ V ++YIEFEDEDID+I
Sbjct: 121 GDLDDDDDVVGEDYIEFEDEDIDRI 145
>AT5G35680.3 | Nucleic acid-binding%2C OB-fold-like protein |
Chr5:13858085-13858589 REVERSE LENGTH=150 | 201606
Length = 150
Score = 235 bits (600), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 113/119 (94%), Positives = 116/119 (97%)
Query: 1 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCH 60
MPKNKGKGGKNRKRGKNEADDEKREL+FKEDGQEYAQVLRMLGNGRC+ MCIDG KRLCH
Sbjct: 1 MPKNKGKGGKNRKRGKNEADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCH 60
Query: 61 IRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI 119
IRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLNEGI
Sbjct: 61 IRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLNEGI 119