BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0290.1
(1472 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 222 2e-65
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 225 1e-59
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 225 1e-59
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 87 5e-20
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 68 2e-12
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 222 bits (566), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1161 IIGGSSSSLLKTLITTLSKEFAMKDLGSLHFFLGIEVTKDESSALFLTQKKYALGLLEKA 1220
++ GSS++LL LI LS F+MKDLG +H+FLGI++ K S LFL+Q KYA +L A
Sbjct: 11 LLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLFLSQTKYAEQILNNA 69
Query: 1221 DLLDSKPSCTPLSINRLSKNDGELISDPSFYRSIIGGLQYLTMTKPDLAYAVNYAAQFMQ 1280
+LD KP TPL + S DPS +RSI+G LQYLT+T+PD++YAVN Q M
Sbjct: 70 GMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 129
Query: 1281 SPRSSHLQLLKKILRYVKGTINCGITITPGDISKLRGYSDSDWAGCPDSRRSTSGVCVVL 1340
P + LLK++LRYVKGTI G+ I ++ + DSDWAGC +RRST+G C L
Sbjct: 130 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 189
Query: 1341 GNSLVNWSSKKQPTVAKSSTEAEYKALSSTAAELLWVS 1378
G ++++WS+K+QPTV++SSTE EY+AL+ TAAEL W S
Sbjct: 190 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
Score = 102 bits (253), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 1058 LVLLLYVDDIILTGSSSSLLKTLITTLSKEFAMKDLGSLHFFLGIEVTKDESSALFLTQK 1117
+ LLLYVDDI+LTGSS++LL LI LS F+MKDLG +H+FLGI++ K S LFL+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLFLSQT 59
Query: 1118 KYALGLLEKADLLDAKPSCTPVSINRLSKNDGELISDPSFYRSIIGG 1164
KYA +L A +LD KP TP+ + S DPS +RSI+G
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGA 106
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 225 bits (573), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 173/268 (64%), Gaps = 4/268 (1%)
Query: 1161 IIGGSSSSLLKTLITTLSKEFAMKDLGSLHFFLGIEVTKDESSALFLTQKKYALGLLEKA 1220
II ++ + + L + L F ++DLG L +FLG+E+ + ++ + + Q+KYAL LL++
Sbjct: 288 IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS-AAGINICQRKYALDLLDET 346
Query: 1221 DLLDSKPSCTPL--SINRLSKNDGELISDPSFYRSIIGGLQYLTMTKPDLAYAVNYAAQF 1278
LL KPS P+ S+ + + G+ + D YR +IG L YL +T+ D+++AVN +QF
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYRRLIGRLMYLQITRLDISFAVNKLSQF 405
Query: 1279 MQSPRSSHLQLLKKILRYVKGTINCGITITPGDISKLRGYSDSDWAGCPDSRRSTSGVCV 1338
++PR +H Q + KIL Y+KGT+ G+ + +L+ +SD+ + C D+RRST+G C+
Sbjct: 406 SEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCM 465
Query: 1339 VLGNSLVNWSSKKQPTVAKSSTEAEYKALSSTAAELLWVSYLLTELHHPISSPMILYCDN 1398
LG SL++W SKKQ V+KSS EAEY+ALS E++W++ EL P+S P +L+CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 1399 PGAKNIAANPICHARTKHIEVDYHFVRD 1426
A +IA N + H RTKHIE D H VR+
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 207/387 (53%), Gaps = 61/387 (15%)
Query: 851 IAEPS-HRMTTRLRNGISKPKFVPDYVSHFSVR---HHISQ------------SYLTLLL 894
+ EPS H R R KP ++ DY H H ISQ S+L +
Sbjct: 26 VPEPSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIA 81
Query: 895 HHKELSTYKEASQDPNWVKAMEDEFSAL-------------NKM---------------- 925
KE STY EA + W AM+DE A+ NK
Sbjct: 82 KAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 926 TPERYKARLVAKGYHQKDGLDYSETFSPVVKAATIRIVLNLVVSNGWPIQQLDVSNAFLH 985
T ERYKARLVAKGY Q++G+D+ ETFSPV K +++++L + + + QLD+SNAFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 986 GLLQENVYMTQPQGFI----DATNPSYVCHLHKSLYGLKQALRAWFQRFDTFLLSLGFVK 1041
G L E +YM P G+ D+ P+ VC+L KS+YGLKQA R WF +F L+ GFV+
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 1042 SAHDHSMFIQHSKDAILVLLLYVDDIILTGSSSSLLKTLITTLSKEFAMKDLGSLHFFLG 1101
S DH+ F++ + L +L+YVDDII+ ++ + + L + L F ++DLG L +FLG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1102 IEVTKDESSALFLTQKKYALGLLEKADLLDAKPSCTPV--SINRLSKNDGELISDPSFYR 1159
+E+ + ++ + + Q+KYAL LL++ LL KPS P+ S+ + + G+ + D YR
Sbjct: 322 LEIARS-AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYR 379
Query: 1160 SIIGGSSSSLLKTLITTLSKEFAMKDL 1186
+IG L+ IT L FA+ L
Sbjct: 380 RLIG----RLMYLQITRLDISFAVNKL 402
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 225 bits (573), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 173/268 (64%), Gaps = 4/268 (1%)
Query: 1161 IIGGSSSSLLKTLITTLSKEFAMKDLGSLHFFLGIEVTKDESSALFLTQKKYALGLLEKA 1220
II ++ + + L + L F ++DLG L +FLG+E+ + ++ + + Q+KYAL LL++
Sbjct: 288 IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS-AAGINICQRKYALDLLDET 346
Query: 1221 DLLDSKPSCTPL--SINRLSKNDGELISDPSFYRSIIGGLQYLTMTKPDLAYAVNYAAQF 1278
LL KPS P+ S+ + + G+ + D YR +IG L YL +T+ D+++AVN +QF
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYRRLIGRLMYLQITRLDISFAVNKLSQF 405
Query: 1279 MQSPRSSHLQLLKKILRYVKGTINCGITITPGDISKLRGYSDSDWAGCPDSRRSTSGVCV 1338
++PR +H Q + KIL Y+KGT+ G+ + +L+ +SD+ + C D+RRST+G C+
Sbjct: 406 SEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCM 465
Query: 1339 VLGNSLVNWSSKKQPTVAKSSTEAEYKALSSTAAELLWVSYLLTELHHPISSPMILYCDN 1398
LG SL++W SKKQ V+KSS EAEY+ALS E++W++ EL P+S P +L+CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525
Query: 1399 PGAKNIAANPICHARTKHIEVDYHFVRD 1426
A +IA N + H RTKHIE D H VR+
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553
Score = 224 bits (571), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 207/387 (53%), Gaps = 61/387 (15%)
Query: 851 IAEPS-HRMTTRLRNGISKPKFVPDYVSHFSVR---HHISQ------------SYLTLLL 894
+ EPS H R R KP ++ DY H H ISQ S+L +
Sbjct: 26 VPEPSVHTSHRRTR----KPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIA 81
Query: 895 HHKELSTYKEASQDPNWVKAMEDEFSAL-------------NKM---------------- 925
KE STY EA + W AM+DE A+ NK
Sbjct: 82 KAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 926 TPERYKARLVAKGYHQKDGLDYSETFSPVVKAATIRIVLNLVVSNGWPIQQLDVSNAFLH 985
T ERYKARLVAKGY Q++G+D+ ETFSPV K +++++L + + + QLD+SNAFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 986 GLLQENVYMTQPQGFI----DATNPSYVCHLHKSLYGLKQALRAWFQRFDTFLLSLGFVK 1041
G L E +YM P G+ D+ P+ VC+L KS+YGLKQA R WF +F L+ GFV+
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 1042 SAHDHSMFIQHSKDAILVLLLYVDDIILTGSSSSLLKTLITTLSKEFAMKDLGSLHFFLG 1101
S DH+ F++ + L +L+YVDDII+ ++ + + L + L F ++DLG L +FLG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1102 IEVTKDESSALFLTQKKYALGLLEKADLLDAKPSCTPV--SINRLSKNDGELISDPSFYR 1159
+E+ + ++ + + Q+KYAL LL++ LL KPS P+ S+ + + G+ + D YR
Sbjct: 322 LEIARS-AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV-DAKAYR 379
Query: 1160 SIIGGSSSSLLKTLITTLSKEFAMKDL 1186
+IG L+ IT L FA+ L
Sbjct: 380 RLIG----RLMYLQITRLDISFAVNKL 402
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 87.4 bits (215), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 1260 YLTMTKPDLAYAVNYAAQFMQSPRSSHLQLLKKILRYVKGTINCGITITPGDISKLRGYS 1319
YLT+T+PDL +AVN +QF + R++ +Q + K+L YVKGT+ G+ + +L+ ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1320 DSDWAGCPDSRRSTSGVC 1337
DSDWA CPD+RRS +G C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 36/116 (31%)
Query: 897 KELSTYKEASQDPNWVKAMEDEFSALNK-----------------------------MTP 927
KE + A +DP W +AM++E AL++ T
Sbjct: 26 KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTL 85
Query: 928 ERYKARLVAKGYHQKDGLDYSETFSPVVKAATIRIVLNLVVSNGWPIQQLDVSNAF 983
+R KARLVAKG+HQ++G+ + ET+SPVV+ ATIR +LN+ QQL+V +
Sbjct: 86 DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVGQSI 134