BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0300.1
(115 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343... 62 4e-12
AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWAR... 55 3e-10
>AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343 |
201606
Length = 343
Score = 61.6 bits (148), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 2 QEACSRDVKRAFNVKRAFDVFKIDLHLLKDSHDFEKKVYHDIMTTCIIMHNMIIEDEREK 61
QEAC +DV+RAF V + F I + S + K V HDIMT+CIIMHNMIIEDER+
Sbjct: 257 QEACRKDVERAFGVLQL--RFAI---VAGPSRLWNKTVLHDIMTSCIIMHNMIIEDERDI 311
Query: 62 DVE 64
D
Sbjct: 312 DAP 314
>AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWARD
LENGTH=157 | 201606
Length = 157
Score = 54.7 bits (130), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 8/73 (10%)
Query: 35 FEKKVYHDIMTTCIIMHNMIIEDEREKDVEHIYQTHDLGAHDLGAHDLGENILEDDTENF 94
+ K + HDIMT+CIIMHNMIIEDER+ D I + ++ ++ + DD F
Sbjct: 70 WNKTILHDIMTSCIIMHNMIIEDERDIDAP-IEERVEVPIEEV-------EMTGDDDTRF 121
Query: 95 AQFLSRYKRIKDK 107
+FL+R+++IKD+
Sbjct: 122 QEFLARHRQIKDR 134