BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0310.1
(201 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 125 3e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 125 3e-33
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 100 1e-25
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 125 bits (315), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 2 HSPRVPHLTAAKRILRYLKGTITHGIQFT-KGPISLNSYSDADWAGDYNDRRSTGGYVIY 60
+PR+ H A +IL Y+KGT+ G+ ++ + + L +SDA + + RRST GY ++
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 61 LGPNPVSWSAKKQSTVAQSSTESDYR--SFAA-EITWLTYLLQDLRIFLHDVPSILCDNI 117
LG + +SW +KKQ V++SS E++YR SFA E+ WL ++L++ L + CDN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 118 SAISLASNPVFHARTKHVEIDYHYVRE 144
+AI +A+N VFH RTKH+E D H VRE
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 125 bits (315), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 2 HSPRVPHLTAAKRILRYLKGTITHGIQFT-KGPISLNSYSDADWAGDYNDRRSTGGYVIY 60
+PR+ H A +IL Y+KGT+ G+ ++ + + L +SDA + + RRST GY ++
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466
Query: 61 LGPNPVSWSAKKQSTVAQSSTESDYR--SFAA-EITWLTYLLQDLRIFLHDVPSILCDNI 117
LG + +SW +KKQ V++SS E++YR SFA E+ WL ++L++ L + CDN
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526
Query: 118 SAISLASNPVFHARTKHVEIDYHYVRE 144
+AI +A+N VFH RTKH+E D H VRE
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 100 bits (248), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 1 MHSPRVPHLTAAKRILRYLKGTITHGIQFTKG-PISLNSYSDADWAGDYNDRRSTGGYVI 59
MH P + KR+LRY+KGTI HG+ K +++ ++ D+DWAG + RRST G+
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187
Query: 60 YLGPNPVSWSAKKQSTVAQSSTESDYRSF---AAEITW 94
+LG N +SWSAK+Q TV++SSTE++YR+ AAE+TW
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225