BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0320.1
(559 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 3e-21
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 3e-21
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 81 1e-17
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 79 2e-16
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 4e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 363 ILLLEDNEPSTYNQAMTSPDSEKWLKAMRSEMDSMSENQVWNLIDLPDGAKPIGCKWVFK 422
+ + + EPSTYN+A + W AM E+ +M W + LP KPIGCKWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 423 VKTDKDGNVSVFKARLVSKGYKQIHGIDYDETFSPQDIIDQLKQSFAMKDL 473
+K + DG + +KARLV+KGY Q GID+ ETFSP + +K A+ +
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%)
Query: 463 QLKQSFAMKDLGSLHYFLGLEVFRDTNGMFLSQSKYVLDLLTKTDMQGAKPCNTPISTSE 522
QLK F ++DLG L YFLGLE+ R G+ + Q KY LDLL +T + G KP + P+ S
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362
Query: 523 KLDPYSGSLLEDPTVFRSMVGALQYLYLDK 552
+SG D +R ++G L YL + +
Sbjct: 363 TFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 363 ILLLEDNEPSTYNQAMTSPDSEKWLKAMRSEMDSMSENQVWNLIDLPDGAKPIGCKWVFK 422
+ + + EPSTYN+A + W AM E+ +M W + LP KPIGCKWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 423 VKTDKDGNVSVFKARLVSKGYKQIHGIDYDETFSPQDIIDQLKQSFAMKDL 473
+K + DG + +KARLV+KGY Q GID+ ETFSP + +K A+ +
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%)
Query: 463 QLKQSFAMKDLGSLHYFLGLEVFRDTNGMFLSQSKYVLDLLTKTDMQGAKPCNTPISTSE 522
QLK F ++DLG L YFLGLE+ R G+ + Q KY LDLL +T + G KP + P+ S
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362
Query: 523 KLDPYSGSLLEDPTVFRSMVGALQYLYLDK 552
+SG D +R ++G L YL + +
Sbjct: 363 TFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 81.3 bits (199), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 370 EPSTYNQAMTSPDSEKWLKAMRSEMDSMSENQVWNLIDLPDGAKPIGCKWVFKVKTDKDG 429
EP + A+ P W +AM+ E+D++S N+ W L+ P +GCKWVFK K DG
Sbjct: 27 EPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83
Query: 430 NVSVFKARLVSKGYKQIHGIDYDETFSPQ----------DIIDQLKQSFAMKDLGSLHYF 479
+ KARLV+KG+ Q GI + ET+SP ++ QL+ ++ + +H+
Sbjct: 84 TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEVGQSINWMFKMHFS 143
Query: 480 LGL 482
+G+
Sbjct: 144 MGI 146
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 79.3 bits (194), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 460 IIDQLKQSFAMKDLGSLHYFLGLEVFRDTNGMFLSQSKYVLDLLTKTDMQGAKPCNTPIS 519
+I QL +F+MKDLG +HYFLG+++ +G+FLSQ+KY +L M KP +TP+
Sbjct: 23 LIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP 82
Query: 520 TSEKLD-PYSGSLLEDPTVFRSMVGALQYLYLDK 552
KL+ S + DP+ FRS+VGALQYL L +
Sbjct: 83 L--KLNSSVSTAKYPDPSDFRSIVGALQYLTLTR 114
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 63.9 bits (154), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 156 NSTLLDMVRSMMSLANLPNTFWGYALETAAFTLNRAPSKAVE-KTPYELWFGKIPKLSFL 214
N T+++ VRSM+ LP TF A TA +N+ PS A+ P E+WF +P S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 215 KVWGCEVYVKRLQGDKLAPKSDK 237
+ +GC Y+ +G KL P++ K
Sbjct: 62 RRFGCVAYIHCDEG-KLKPRAKK 83