BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000102.1_g0340.1
         (218 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143...    86   3e-19
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292...    69   3e-13

>AT4G29090.1 | Ribonuclease H-like superfamily protein |
           Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
          Length = 575

 Score = 86.3 bits (212), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 32/241 (13%)

Query: 3   WRLKTEPEAIWAKLIKAKYFPNKSTP--GPAKSHHSWNWKTIRRYYNMVNDLSTWEVNSG 60
           WR+ + PE++ AK+ K++YF +KS P   P  S  S+ WK+I     ++   +   V +G
Sbjct: 74  WRMLSRPESLMAKVFKSRYF-HKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNG 132

Query: 61  QEVNIWTDSWIPDLNT----------PLTNVNNSPLTKVAQLIINN--EWNDEILRVTFD 108
           +++ IW   W+               P    + S + KV+ LI  +  EW  +++ + F 
Sbjct: 133 EDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFP 192

Query: 109 THTQNLIKTL-PINQEGKDQLKWKLTKTGGFTVASMYKYLTS-----------NNTMNNP 156
              + LI  L P  +   D   W  T +G +TV S Y  LT            +    NP
Sbjct: 193 EVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNP 252

Query: 157 ITRNWKFIWNLPTIPRIKNFIWKVCNEALPVRGRIG-KYIGNRFNCPNC-NITESIEHAL 214
           I +    IW   T P+I++F+WK  + +LPV G +  +++     C  C +  E++ H L
Sbjct: 253 IYQK---IWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLL 309

Query: 215 Y 215
           +
Sbjct: 310 F 310


>AT3G09510.1 | Ribonuclease H-like superfamily protein |
           Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
          Length = 484

 Score = 68.6 bits (166), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 34/227 (14%)

Query: 17  IKAKYFPNKST-PGPAKSHHSWNWKTIRRYYNMVNDLSTWEVNSGQEVNIWTDSWIPDLN 75
           +KA+YF + S      +   S+ W ++     ++   +   +  GQ + I  D+ +   +
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVD--S 58

Query: 76  TPLTNVNNSPLTKVAQLIINNE---------WNDEILRVTFDTHTQNLIKTLPINQEGK- 125
            P   +N     K  ++ INN          W+D  +    D      I  + + +  K 
Sbjct: 59  HPPRPLNTEETYK--EMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKP 116

Query: 126 DQLKWKLTKTGGFTVASMYKYLTSNNTMNNPI-----------TRNWKFIWNLPTIPRIK 174
           D++ W    TG +TV S Y  LT + + N P            TR    IWNLP +P++K
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTR----IWNLPIMPKLK 172

Query: 175 NFIWKVCNEALPVRGRIGKYIGNRFN--CPNCNIT-ESIEHALYTVP 218
           +F+W+  ++AL    R+    G R +  CP C+   ESI HAL+T P
Sbjct: 173 HFLWRALSQALATTERLTTR-GMRIDPSCPRCHRENESINHALFTCP 218


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