BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0350.1
(186 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 67 2e-13
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 65 7e-13
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 1e-12
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 58 5e-10
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 58 8e-10
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 67.0 bits (162), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 26 KWQPPPNNMIKINVDASFTDISSNMGISMIAHNDKS--FFIGAQVKSSRARNSEESEAKA 83
+W+ PP +K N DA++ + GI I N+ ++GA+ R +N E+E +A
Sbjct: 136 QWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALP-RTKNVLEAELEA 194
Query: 84 ILLGIEWAKEMNHHSIIIESDNINLINHLRNDKHAVQWQSILHIKKIKSYIHQFQKINFQ 143
+ + N+ II ESD L+N L +D Q L + I+ +H F+++ F+
Sbjct: 195 LRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDFWPTLQPAL--EDIQQLLHHFEEVKFE 252
Query: 144 YTGRKLNHNADKLAK 158
+T R N AD++A+
Sbjct: 253 FTPRGGNKVADRIAR 267
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 65.5 bits (158), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 14 NKDRNIYSSTDEKWQPPPNNMIKINVDASFTDISSNMGISMIAHNDKSFFIGAQVKSSRA 73
N +RN S + KW PP + +K N DAS + ++ G+ I N + I + +
Sbjct: 92 NGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQG 151
Query: 74 R-NSEESEAKAILLGIEWAKEMNHHSIIIESDNINLINHLRNDKHAVQWQSILHIKKIKS 132
R +EE+E ++ I+ + H +I E DN + + + Q L I+S
Sbjct: 152 RMTTEEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFL--DTIQS 209
Query: 133 YIHQFQKINFQYTGRKLNHNADKLAKWARKNRRDKVWINEPCILVNKYCNN 183
+I F+ I F + R+ N AD LAK A K + ++ Y NN
Sbjct: 210 WIPSFESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSPYVNN 260
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 64.3 bits (155), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 22 STDEKWQPPPNNMIKINVDASFTDISSNMGISMIAHNDKSFFIG-AQVKSSRARNSEESE 80
ST +KW+ PP IK N D SF + + +DK F+ G AQ N+ ESE
Sbjct: 58 STHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTMNNALESE 117
Query: 81 AKAILLGIEWAKEMNHHSIIIESDNIN---LINHLRNDKHAVQWQSILHIKKIKSYIHQF 137
+A+++ ++ + +I E D+ L+N + A W I++ S+ +F
Sbjct: 118 LQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRKQMHFGAFNW-----IREAWSWSKRF 172
Query: 138 QKINFQYTGRKLNHNADKLAK 158
+++ F +T R N AD LAK
Sbjct: 173 EEVIFSWTPRTNNQPADMLAK 193
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 58.2 bits (139), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 27 WQPPPNNMIKINVDASF--TDISSNMGISMIAHNDKSFFIGAQVKSSRARNSEESEAKAI 84
W+ P N +K NVD SF +I G + HN + F G Q + N+ E E +A+
Sbjct: 503 WRRPTNGWVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAG-QAIGNCIDNALECEFQAL 561
Query: 85 LLGIEWAKEMNHHSIIIESDN---INLINHLRNDKHAVQWQSILHIKKIKSYIHQFQKIN 141
L+ ++ + I E DN +LIN L+ A W I+ I + +F++
Sbjct: 562 LMAMQHCWSKGYRRICFEGDNKEMFDLINGLKMHFGAFNW-----IRDILWWASKFEQTQ 616
Query: 142 FQYTGRKLNHNADKLAK 158
FQ+T R+ N AD LA+
Sbjct: 617 FQWTNRQNNKPADILAR 633
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 57.8 bits (138), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 15/144 (10%)
Query: 22 STDEKWQPPPNNMIKINVDASFTDISSNMGISMIAHNDKSFFIGAQVK--SSRARNSEES 79
S+ +W+PPP+ +K N DA++ + GI + N+K +VK +RA +S
Sbjct: 415 SSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEK-----GEVKWMGARALPKLKS 469
Query: 80 EAKAILLGIEWA----KEMNHHSIIIESDNINLINHLRNDKHAVQWQSI-LHIKKIKSYI 134
+A L + WA ++ +I ESD+ LI L ND+ W S+ I+ ++ +
Sbjct: 470 VLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEI---WPSLKPTIQDLQRLL 526
Query: 135 HQFQKINFQYTGRKLNHNADKLAK 158
QF ++ F + R+ N A+++A+
Sbjct: 527 SQFTEVKFVFIPREGNTLAERVAR 550