BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000102.1_g0410.1
         (161 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447...    70   4e-15

>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
           Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
          Length = 237

 Score = 70.5 bits (171), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 7   DSSGTKSVPIMVHSESIFN-AGIILTESNYDMWSQLMEMHLAEREKLSFIQGKTKPPSES 65
           D      +P  +H  S F+   +   E NY  W       L   +K  FI G    P   
Sbjct: 13  DPDSPYYLPPDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF 72

Query: 66  DDGYEKWYAENQKVKRWLLMSMTPEIMKRYIRLLTAQEIWSALSRAFYDGSDELQVFSLN 125
              Y+ W   N  V  WL+ SMT ++++  +   TA ++W  L R F    D L+++ L 
Sbjct: 73  SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVD-LKIYQLR 131

Query: 126 KRAFAARQSGKSLSEYYGEITEIFREL 152
           +R    RQ G S+ EY+G++++++ EL
Sbjct: 132 RRLATLRQGGDSVEEYFGKLSKVWMEL 158

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