BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0420.1
(1181 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 459 e-143
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 459 e-143
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 192 3e-55
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 108 6e-27
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 67 4e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 459 bits (1180), Expect = e-143, Method: Compositional matrix adjust.
Identities = 229/538 (42%), Positives = 347/538 (64%), Gaps = 14/538 (2%)
Query: 608 NLESEPPKRQLPSRQT--RGIPKPTYEP-----GLSSKVRYPMSNYVSNHRLSESNKSFV 660
N++++ P+ PS T R KP Y ++S + +S ++S ++S SF+
Sbjct: 21 NIQNDVPE---PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFL 77
Query: 661 NQLSLVAIPNSVQEALTDPRWKAAMNEELEALQKNKTWDLVECPPGKKPVGCRWVYTVKY 720
++ P++ EA W AM++E+ A++ TW++ PP KKP+GC+WVY +KY
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 721 KADGSVERFKARLVAKGYTQTYGIDYTETFAPVAKINTVRVLLSLAVNLDWPLQQFDVKN 780
+DG++ER+KARLVAKGYTQ GID+ ETF+PV K+ +V+++L+++ ++ L Q D+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 781 AFLHGELTEEIYMELPSGCMPLEKQS---HKVCKLRKSLYGLKQSPRAWFGRFTKSMKSF 837
AFL+G+L EEIYM+LP G + S + VC L+KS+YGLKQ+ R WF +F+ ++ F
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 838 GYHQSNSDHTLFLKRKHDKITALIVYVDDMVVTGNDLEEQKALKNYLSSEFEMKDLGPLK 897
G+ QS+SDHT FLK ++VYVDD+++ N+ LK+ L S F+++DLGPLK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 898 YFLGIEVSRSSKGIFLSQRKYALDLLQETGMSGCQPIDTPLEEGLKLCAQPNQIPADKGR 957
YFLG+E++RS+ GI + QRKYALDLL ETG+ GC+P P++ + A D
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 958 YQRLVRRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMHILRYLKGAPGKGILFTKN 1017
Y+RL+ RLMYL TR D+++A++ +SQ+ P H AVM IL Y+KG G+G+ ++
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 1018 AGNRDIEVYTDADWAGAVDDRRSTSGYFTFVGGNLVTWRSKKQNVVARSSAEAEFRSLAL 1077
A ++V++DA + D RRST+GY F+G +L++W+SKKQ VV++SSAEAE+R+L+
Sbjct: 438 A-EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 1078 GLCEALWLRLLLQDLGYHSSQPINLFCDNKAASDIAHNPVQHDRTKHVVVDRFFIKEK 1135
E +WL ++L S+P LFCDN AA IA N V H+RTKH+ D ++E+
Sbjct: 497 ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 459 bits (1180), Expect = e-143, Method: Compositional matrix adjust.
Identities = 229/538 (42%), Positives = 347/538 (64%), Gaps = 14/538 (2%)
Query: 608 NLESEPPKRQLPSRQT--RGIPKPTYEP-----GLSSKVRYPMSNYVSNHRLSESNKSFV 660
N++++ P+ PS T R KP Y ++S + +S ++S ++S SF+
Sbjct: 21 NIQNDVPE---PSVHTSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFL 77
Query: 661 NQLSLVAIPNSVQEALTDPRWKAAMNEELEALQKNKTWDLVECPPGKKPVGCRWVYTVKY 720
++ P++ EA W AM++E+ A++ TW++ PP KKP+GC+WVY +KY
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 721 KADGSVERFKARLVAKGYTQTYGIDYTETFAPVAKINTVRVLLSLAVNLDWPLQQFDVKN 780
+DG++ER+KARLVAKGYTQ GID+ ETF+PV K+ +V+++L+++ ++ L Q D+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 781 AFLHGELTEEIYMELPSGCMPLEKQS---HKVCKLRKSLYGLKQSPRAWFGRFTKSMKSF 837
AFL+G+L EEIYM+LP G + S + VC L+KS+YGLKQ+ R WF +F+ ++ F
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 838 GYHQSNSDHTLFLKRKHDKITALIVYVDDMVVTGNDLEEQKALKNYLSSEFEMKDLGPLK 897
G+ QS+SDHT FLK ++VYVDD+++ N+ LK+ L S F+++DLGPLK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 898 YFLGIEVSRSSKGIFLSQRKYALDLLQETGMSGCQPIDTPLEEGLKLCAQPNQIPADKGR 957
YFLG+E++RS+ GI + QRKYALDLL ETG+ GC+P P++ + A D
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 958 YQRLVRRLMYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMHILRYLKGAPGKGILFTKN 1017
Y+RL+ RLMYL TR D+++A++ +SQ+ P H AVM IL Y+KG G+G+ ++
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 1018 AGNRDIEVYTDADWAGAVDDRRSTSGYFTFVGGNLVTWRSKKQNVVARSSAEAEFRSLAL 1077
A ++V++DA + D RRST+GY F+G +L++W+SKKQ VV++SSAEAE+R+L+
Sbjct: 438 A-EMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496
Query: 1078 GLCEALWLRLLLQDLGYHSSQPINLFCDNKAASDIAHNPVQHDRTKHVVVDRFFIKEK 1135
E +WL ++L S+P LFCDN AA IA N V H+RTKH+ D ++E+
Sbjct: 497 ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 192 bits (489), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 860 LIVYVDDMVVTGNDLEEQKALKNYLSSEFEMKDLGPLKYFLGIEVSRSSKGIFLSQRKYA 919
L++YVDD+++TG+ L LSS F MKDLGP+ YFLGI++ G+FLSQ KYA
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 920 LDLLQETGMSGCQPIDTPLEEGLKLCAQPNQIPADKGRYQRLVRRLMYLAHTRPDLAYAL 979
+L GM C+P+ TPL L + P D ++ +V L YL TRPD++YA+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 980 SVVSQYMHNPGEQHMNAVMHILRYLKGAPGKGILFTKNAGNRDIEVYTDADWAGAVDDRR 1039
++V Q MH P + + +LRY+KG G+ KN+ +++ + D+DWAG RR
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTRR 180
Query: 1040 STSGYFTFVGGNLVTWRSKKQNVVARSSAEAEFRSLALGLCEALW 1084
ST+G+ TF+G N+++W +K+Q V+RSS E E+R+LAL E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 108 bits (271), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 70/102 (68%)
Query: 669 PNSVQEALTDPRWKAAMNEELEALQKNKTWDLVECPPGKKPVGCRWVYTVKYKADGSVER 728
P SV AL DP W AM EEL+AL +NKTW LV P + +GC+WV+ K +DG+++R
Sbjct: 28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87
Query: 729 FKARLVAKGYTQTYGIDYTETFAPVAKINTVRVLLSLAVNLD 770
KARLVAKG+ Q GI + ET++PV + T+R +L++A L+
Sbjct: 88 LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.4 bits (163), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 966 MYLAHTRPDLAYALSVVSQYMHNPGEQHMNAVMHILRYLKGAPGKGILFTKNAGNRDIEV 1025
MYL TRPDL +A++ +SQ+ M AV +L Y+KG G+G+ ++ + + ++
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS-DLQLKA 59
Query: 1026 YTDADWAGAVDDRRSTSGYFTFV 1048
+ D+DWA D RRS +G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82