BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0450.1
(1275 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 157 2e-39
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 135 1e-32
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292... 100 2e-21
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 93 3e-20
AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920... 92 2e-19
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 157 bits (396), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 192/402 (47%), Gaps = 25/402 (6%)
Query: 166 LVIGDLNTIMHPSEK-SGPPKPIPSKA-RKIVSIIQDLGLHDLGFSGSSFTWSNRQFQGS 223
+++GD + I S+ S IP + + + ++D L D+ G +TWSN Q
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281
Query: 224 MIQERLDRALANMSWLSSLPFS-RIRHLQGVGSDHLPILLSTNSLPPQSSKPFKFIRTWM 282
+I+ +LDRA+AN W SS P + + L GV SDH P ++ +LP +S K F++
Sbjct: 282 IIR-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLS 339
Query: 283 SHPECQNFILENW------NTNHYLIQQKLNQLARKLSQWNKTVFGHVEQNIKHLTTLIQ 336
+HP + W ++ + + + L + N+ FG+++ K ++
Sbjct: 340 THPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLE 399
Query: 337 SIH-----NP-ESLLQLTSQLEEAYNL----QESIWKEKSRVAHVQLGDRNTKFFHAKAI 386
SI NP +SL ++ + +N ES +++KSR+ +Q GD NT+FFH +
Sbjct: 400 SIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVIL 459
Query: 387 TRNRKNHISSIKREDNSWCSEIPEIFNL----FTFNIKKISTTTTDSPTSQIKSLFTTQI 442
KN I ++ +D+ + ++ + +T + S T +IK + +
Sbjct: 460 ANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRC 519
Query: 443 SAAQNTTLSAVPIDEEIRAATFSLKPEAAPGPDGYPPFFYQSNWDTVKTDVIQMVRSFFL 502
+ + LSA+P D+EI AA F++ APGPD + F+ +W VK I V+ FF
Sbjct: 520 NDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFR 579
Query: 503 SACLPPSTNNTHICLIPKTKAPQLTADFRPISLLNTTYKIIT 544
+ L N T I LIPK + FRP+S YKIIT
Sbjct: 580 TGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 135 bits (340), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 205/452 (45%), Gaps = 68/452 (15%)
Query: 856 KSIHTINWAAICKPRKFGGLGTEINIWEDFWIPNHK----------PPIPNHNNCPFNKV 905
KSIH R G G +I IW W+ + PP + KV
Sbjct: 112 KSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKV 171
Query: 906 DQLI--SNHTWKAELLPLYFNDETCRAILSINLHPLAE---DEMVWTLTNSGKFTIKSMY 960
LI S W+ +++ + F E R ++ L P D W T+SG +T+KS Y
Sbjct: 172 SDLIDESGREWRKDVIEMLF-PEVERKLIG-ELRPGGRRILDSYTWDYTSSGDYTVKSGY 229
Query: 961 RYLS--LGTRD-PVTVD-------WSFIWNIKSIPRIKLFLWKCCTNSLPVKGKIG-KYI 1009
L+ + R P V + IW ++ P+I+ FLWKC +NSLPV G + +++
Sbjct: 230 WVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHL 289
Query: 1010 GNNYSCVFCEQ-RESITHVLLHCNFARAVWFHYNI-------RTDGMVSVLEWIM----- 1056
+C+ C +E++ H+L C FAR W +I D + L W+
Sbjct: 290 SKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNG 349
Query: 1057 --QWQSLDDSIVASLAKIMWYIWKVRCEKNFGKKDTSPMQAIRKIQCYDTSLPEKR---- 1110
QW+ + ++W +WK R E F ++ + + +R+ + L E R
Sbjct: 350 NPQWEKASQLV----PWLLWRLWKNRNELVFRGREFNAQEVLRRA---EDDLEEWRIRTE 402
Query: 1111 ------QPNINVIQ-PNWIPPPQPFLKINVDASFSKLSELAGIGCIIRDADGNL--ITAL 1161
+P +N W PPP ++K N DA++++ +E GIG ++R+ G + + A
Sbjct: 403 AESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGAR 462
Query: 1162 AEPVRGQTAEECECIAILKAVLWAEELNLTHIIIEGDNNNLINHIHNATKVINWQSLH-H 1220
A P + ++ E E A+ AVL ++I E D+ LI ++N W SL
Sbjct: 463 ALP-KLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEI---WPSLKPT 518
Query: 1221 MKQIQALCTKFEHILFLYTPRKTNTLADALAK 1252
++ +Q L ++F + F++ PR+ NTLA+ +A+
Sbjct: 519 IQDLQRLLSQFTEVKFVFIPREGNTLAERVAR 550
>AT3G09510.1 | Ribonuclease H-like superfamily protein |
Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
Length = 484
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 153/352 (43%), Gaps = 49/352 (13%)
Query: 942 DEMVWTLTNSGKFTIKSMYRYLSLGTRDPVT-----------VDW-SFIWNIKSIPRIKL 989
D+++W +G++T++S Y L T DP T +D + IWN+ +P++K
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLL---THDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKH 173
Query: 990 FLWKCCTNSLPVKGKIG-KYIGNNYSCVFC-EQRESITHVLLHCNFARAVWFHYN---IR 1044
FLW+ + +L ++ + + + SC C + ESI H L C FA W + IR
Sbjct: 174 FLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIR 233
Query: 1045 TDGMVSVLEWIMQ--WQSLDDSIVASLAKIM-----WYIWKVRCEKNFGKKDTSPMQAI- 1096
M + E + + D+ ++ K++ W IWK R F K SP + +
Sbjct: 234 NQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVL 293
Query: 1097 -RKIQCYD---TSLPEKRQPN----INVIQPNWIPPPQPFLKINVDASFSKLSELAGIGC 1148
K + +D + K+ P+ I + W PP ++K N DA F A G
Sbjct: 294 SAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGW 353
Query: 1149 IIRDADGNLIT-ALAEPVRGQTAEECECIAILKAVLWAEELNLTHIIIEGDNNNLINHIH 1207
IIR+ G I+ + E E A+L A+ T + +EGD LIN
Sbjct: 354 IIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLIN--- 410
Query: 1208 NATKVINWQSLH-----HMKQIQALCTKFEHILFLYTPRKTNTLADALAKWG 1254
+IN S H H++ I KF I F + RK N LA LAK+G
Sbjct: 411 ----LINGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYG 458
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 32/271 (11%)
Query: 1007 KYIGNNYSCVFC-EQRESITHVLLHCNFARAVW-------FHYNIRTDGMVSVLEWIMQW 1058
+++ SCV C + RE++ H+L C FAR VW + TD + + L W++
Sbjct: 4 RHLFREASCVRCPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVL-- 61
Query: 1059 QSLDDSIVASLAKI-------MWYIWKVRCEKNFGKKDTSPMQAIRKIQCYDTSLPEKRQ 1111
+L+ I L KI +W +WK R E F K+ + +R+ +R+
Sbjct: 62 -NLEVEI-PKLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRE 119
Query: 1112 PNINVIQPN--------WIPPPQPFLKINVDASFSKLSELAGIGCIIRDADGNLITALAE 1163
P W PP ++K N DA++ + GIG I+R+ G ++ A
Sbjct: 120 LEGKASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGAR 179
Query: 1164 PV-RGQTAEECECIAILKAVLWAEELNLTHIIIEGDNNNLINHIHNATKVINWQSLH-HM 1221
+ R + E E A+ AVL N II E D L+N +++ W +L +
Sbjct: 180 ALPRTKNVLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDD---FWPTLQPAL 236
Query: 1222 KQIQALCTKFEHILFLYTPRKTNTLADALAK 1252
+ IQ L FE + F +TPR N +AD +A+
Sbjct: 237 EDIQQLLHHFEEVKFEFTPRGGNKVADRIAR 267
>AT3G25270.1 | Ribonuclease H-like superfamily protein |
Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
Length = 343
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 42/308 (13%)
Query: 978 IWNIKSIPRIKLFLWKCCTNSLPVKGKIGK-YIGNNYSC-VFCEQRESITHVLLHCNFAR 1035
IW +K+ P+IK FLWK + +L + + +I N+ C C++ E+ H+ C +A+
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 1036 AVWF-----HYNIRTDG--MVSVLEWIMQWQSLDDSIVASLAK--------IMWYIWKVR 1080
VW H +RT G M + +E ++ S +A+ I+W +WK R
Sbjct: 78 QVWRASGIPHQELRTTGITMETKMELLL------SSCLANRQPQLFNLAIWILWRLWKSR 131
Query: 1081 CEKNFGKKDTSPMQAIRK--------------IQCYDTSLPEKRQPNINVIQPNWIPPPQ 1126
+ F +K S +++ +Q + + R + + W PP
Sbjct: 132 NQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPS 191
Query: 1127 PFLKINVDASFSKLSELAGIGCIIRDADGNLITALAEPVRGQTAE--ECECIAILKAVLW 1184
++K N D +F+ + A G ++RD +G + + + T++ E E A++ A+
Sbjct: 192 TWIKYNYDGAFNHQTRNAKAGWLMRDENG-VYMGSGQAIGSTTSDSLESEFQALIIAMQH 250
Query: 1185 AEELNLTHIIIEGDNNNLINHIHNATKVINWQSLHHMKQIQALCTKFEHILFLYTPRKTN 1244
A +I EGD+ + ++N + +N+ + +++ + +FE +F + PR N
Sbjct: 251 AWSQGYRKVIFEGDSKQVEELMNN--EKLNFGRFNWIREGRFWQKRFEEAVFKWVPRTNN 308
Query: 1245 TLADALAK 1252
AD LAK
Sbjct: 309 QPADILAK 316