BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0480.1
(113 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G33406.1 | hAT dimerization domain-containing protein / trans... 48 2e-07
>AT5G33406.1 | hAT dimerization domain-containing protein /
transposase-like protein | Chr5:12676126-12678403
REVERSE LENGTH=509 | 201606
Length = 509
Score = 48.1 bits (113), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 18 RDYSIDPIVLREVDENDEWII------PTDEELQDFVNRGDDLRWEDVREAQGVTSIERR 71
R+ + DPI+L E+D+ +EW+ +D E D V DDL W +V EA G
Sbjct: 286 RNDTFDPILLNEIDQCNEWLTGRMEENSSDTENDDLVFENDDLTWAEVGEAAGAND-PYY 344
Query: 72 RTRSQMASS--------------------SSTTPTSRPPMELVDEDSDADIEVDGSQFE 110
TRS ASS S TP S PM LVDED + + + G+++E
Sbjct: 345 ATRSTAASSRFEKGKGIASDSGGHGNSRASRKTPNSSRPMTLVDEDEEMEDDFLGAEYE 403