BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0590.1
(332 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 97 7e-22
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 76 3e-15
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 97.1 bits (240), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 77 LESLWKEKSRNDNIKLGDQNTKFFHAKAINRNRKNRITAIKDNNGTWVQEDLDIANIFST 136
LES +++KSR ++ GD NT+FFH + KN I ++ ++ V+ + +
Sbjct: 431 LESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVA 490
Query: 137 NLCSIFTTSDSIIS----DELLDLFFVQITDSSNLALTSVPSDLEIYASVMSLKADSAPG 192
+ + I++ + D+ + D+ L+++PSD EI A+V ++ + APG
Sbjct: 491 YYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 550
Query: 193 PDGFPPLFYQTNWDTVKADIIKLVSDFFTHTLLPEQVNHTHICLIPKTKTPQTTSDYRPI 252
PD F F+ +W VK I V +FF L ++ N T I LIPK S +RP+
Sbjct: 551 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 610
Query: 253 SLMNTTYKIIT 263
S YKIIT
Sbjct: 611 SCCTVVYKIIT 621
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 266 MANRLKLVLPEIISPFQAAYVPGRQITDNIIISQEIVHSFKIIKGSKSYFALKLDMSKAF 325
M RLK ++ +I P QA+++PGR TDNI+ QE VHS + KG K + LKLD+ KA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 326 DRIEWSF 332
DRI W +
Sbjct: 61 DRIRWDY 67