BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0780.1
(72 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343... 91 1e-23
AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWAR... 51 1e-09
>AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343 |
201606
Length = 343
Score = 91.3 bits (225), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 1 MMQEACRKDVERASGVLQARFAIIKEPGRFWDKEVLHDIINACNIMHNMIVEDEREKD 58
M QEACRKDVERA GVLQ RFAI+ P R W+K VLHDI+ +C IMHNMI+EDER+ D
Sbjct: 255 MKQEACRKDVERAFGVLQLRFAIVAGPSRLWNKTVLHDIMTSCIIMHNMIIEDERDID 312
>AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWARD
LENGTH=157 | 201606
Length = 157
Score = 51.2 bits (121), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 24 IKEPGRFWDKEVLHDIINACNIMHNMIVEDEREKD 58
+ P R W+K +LHDI+ +C IMHNMI+EDER+ D
Sbjct: 63 VTGPSRLWNKTILHDIMTSCIIMHNMIIEDERDID 97